PubChem: a public information system for analyzing bioactivities of small molecules.

PubChem: a public information system for analyzing bioactivities of small molecules.
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DOI:
10.1093/nar/gkp456
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发表时间:
2009-07
影响因子:
14.9
通讯作者:
Bryant SH
Bryant SH
中科院分区:
生物学2区
文献类型:
--
作者:
Wang Y;Xiao J;Suzek TO;Zhang J;Wang J;Bryant SH

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PubChem (http://pubchem.ncbi.nlm.nih.gov) 是由美国国立卫生研究院 (NIH) 托管的小分子生物学特性公共存储库。 PubChem BioAssay 数据库目前包含超过 700 000 种化合物的生物测试结果。 PubChem 的目标是让生物医学研究人员能够轻松获取这些信息。在这项工作中,我们提出了一组网络服务器来促进和优化 PubChem 中生物活性信息的利用。这些基于网络的服务提供了快速数据检索、生物筛选结果整合和比较、探索性结构-活性分析和目标选择性检查的工具。本文回顾了这些生物活性分析工具并讨论了它们的用途。这项工作中描述的大多数工具可以直接访问http://pubchem.ncbi.nlm.nih.gov/assay/。用于访问本工作中描述的其他工具的 URL 是单独指定的。
PubChem (http://pubchem.ncbi.nlm.nih.gov) is a public repository for biological properties of small molecules hosted by the US National Institutes of Health (NIH). PubChem BioAssay database currently contains biological test results for more than 700 000 compounds. The goal of PubChem is to make this information easily accessible to biomedical researchers. In this work, we present a set of web servers to facilitate and optimize the utility of biological activity information within PubChem. These web-based services provide tools for rapid data retrieval, integration and comparison of biological screening results, exploratory structure–activity analysis, and target selectivity examination. This article reviews these bioactivity analysis tools and discusses their uses. Most of the tools described in this work can be directly accessed at http://pubchem.ncbi.nlm.nih.gov/assay/. URLs for accessing other tools described in this work are specified individually.
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