AthaMap, integrating transcriptional and post-transcriptional data.
AthaMap, integrating transcriptional and post-transcriptional data.
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AthaMap，整合转录和转录后数据。
DOI：
10.1093/nar/gkn709
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发表时间：
2009-01
影响因子：
14.9
通讯作者：
Hehl, Reinhard
中科院分区：
文献类型：
--
作者：
Buelow, Lorenz;Engelmann, Stefan;Schindler, Martin;Hehl, Reinhard
AthaMap数据库生成了整个拟南芥基因组的预测转录因子结合位点（TFBS）的图谱。AthaMap现在已经扩展到包括转录后调控的数据。共定位了403173个小RNA基因组位点。拟南芥基因组这些鉴定了5772个假定的转录后调节靶基因。AthaMap工具已被修改，以提高共调节基因中常见TFBS的鉴定，通过从此类分析中减去转录后调节基因。此外，AthaMap更新为TAIR7基因组注释，实现了基因分析结果的图形显示，并增加了TFBS数据内容。AthaMap可在http://www.athamap.de/免费获得。
The AthaMap database generates a map of predicted transcription factor binding sites (TFBS) for the whole Arabidopsis thaliana genome. AthaMap has now been extended to include data on post-transcriptional regulation. A total of 403 173 genomic positions of small RNAs have been mapped in the A. thaliana genome. These identify 5772 putative post-transcriptionally regulated target genes. AthaMap tools have been modified to improve the identification of common TFBS in co-regulated genes by subtracting post-transcriptionally regulated genes from such analyses. Furthermore, AthaMap was updated to the TAIR7 genome annotation, a graphic display of gene analysis results was implemented, and the TFBS data content was increased. AthaMap is freely available at http://www.athamap.de/.
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影响因子：
14.9
作者：
Bülow L;Schindler M;Hehl R
通讯作者：
Hehl R
拟南芥信息资源（TAIR）：基因结构和功能注释。
影响因子：
14.9
作者：
Swarbreck, David;Wilks, Christopher;Lamesch, Philippe;Berardini, Tanya Z.;Garcia-Hernandez, Margarita;Foerster, Hartmut;Li, Donghui;Meyer, Tom;Muller, Robert;Ploetz, Larry;Radenbaugh, Amie;Singh, Shanker;Swing, Vanessa;Tissier, Christophe;Zhang, Peifen;Huala, Eva
通讯作者：
Huala, Eva
用于分析和识别共同调节基因的Athamap Web工具。
影响因子：
14.9
作者：
Galuschka, Claudia;Schindler, Martin;Buelow, Lorenz;Hehl, Reinhard
通讯作者：
Hehl, Reinhard
影响因子：
56.9
作者：
Lu, C;Tej, SS;Green, PJ
通讯作者：
Green, PJ
影响因子：
2.9
作者：
Liang, Xinwen;Nazarenus, Tara J.;Stone, Julie M.
通讯作者：
Stone, Julie M.