Uniformity of rotavirus strain nomenclature proposed by the Rotavirus Classification Working Group (RCWG).
Uniformity of rotavirus strain nomenclature proposed by the Rotavirus Classification Working Group (RCWG).
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DOI：
10.1007/s00705-011-1006-z
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发表时间：
2011-08
影响因子：
2.7
通讯作者：
Van Ranst, Marc
中科院分区：
文献类型：
--
作者：
Matthijnssens, Jelle;Ciarlet, Max;McDonald, Sarah M.;Attoui, Houssam;Banyai, Krisztian;Brister, J. Rodney;Buesa, Javier;Esona, Mathew D.;Estes, Mary K.;Gentsch, Jon R.;Iturriza-Gomara, Miren;Johne, Reimar;Kirkwood, Carl D.;Martella, Vito;Mertens, Peter P. C.;Nakagomi, Osamu;Parreno, Viviana;Rahman, Mustafizur;Ruggeri, Franco M.;Saif, Linda J.;Santos, Norma;Steyer, Andrej;Taniguchi, Koki;Patton, John T.;Desselberger, Ulrich;Van Ranst, Marc
2008年4月，针对A组轮状病毒（RV）开发了基于核苷酸序列的完整基因组分类系统。该系统根据已建立的核苷酸百分比截止值，为特定 RV 毒株的 11 个基因组片段中的每一个分配特定的基因型。使用这种方法，单个 RV 菌株的基因组被赋予 Gx-P[x]-Ix-Rx-Cx-Mx-Ax-Nx-Tx-Ex-Hx 的完整描述符。轮状病毒分类工作组 (RCWG) 由该领域的科学家组成，负责维护、评估和开发 RV 基因型分类系统，特别是帮助指定新基因型。自成立以来，该小组已批准了 50 个新基因型：截至 2011 年 1 月，新基因型为 VP7 (G20–G26)、VP4 (P[28]–P[35])、VP6 (I12–I16)、VP1 (R5–R9)、VP2 (C6–C9)、VP3 (M7–M8)、NSP1 (A15–A16)，NSP2 (N6–N9)、NSP3 (T8–T12)、NSP4 (E12–E14) 和 NSP5/6 (H7–H11) 已被定义为在人类、牛、猪、马、小鼠、南美骆驼科动物（原驼和骆马）、鸡、火鸡、野鸡和蝙蝠中发现的 RV 菌株。随着越来越多的完整 RV 基因组序列的出现，需要一个标准化的 RV 毒株命名系统，RCWG 提议将各个 RV 毒株命名如下：RV 组/原产地/鉴定国家/通用名/鉴定年份/G 型和 P 型。 RCWG 还与国家生物技术信息中心 (NCBI) 合作，致力于开发用于沉积核苷酸序列的 RV 特定资源。该资源将提供有关 RV 毒株的有用信息，包括但不限于个体基因基因型、流行病学和临床信息。拟议的命名系统和 NCBI RV 资源将为研究人员搜索、检索和分析不断增长的 RV 基因组数据提供非常有用的工具。
In April 2008, a nucleotide sequence-based, complete genome classification system was developed for group A rotaviruses (RVs). This system assigns a specific genotype to each of the 11 genome segments of a particular RV strain according to established nucleotide percent cut-off values. Using this approach, the genome of individual RV strains are given the complete descriptor of Gx-P[x]-Ix-Rx-Cx-Mx-Ax-Nx-Tx-Ex-Hx. A Rotavirus Classification Working Group (RCWG) was formed by scientists in the field to maintain, evaluate, and develop the RV genotype classification system, in particular to aid in the designation of new genotypes. Since its conception, the group has ratified 50 new genotypes: as of January 2011, new genotypes for VP7 (G20–G26), VP4 (P[28]–P[35]), VP6 (I12–I16), VP1 (R5–R9), VP2 (C6–C9), VP3 (M7–M8), NSP1 (A15–A16), NSP2 (N6–N9), NSP3 (T8–T12), NSP4 (E12–E14), and NSP5/6 (H7–H11) have been defined for RV strains identified in humans, cows, pigs, horses, mice, South American camelids (guanaco and vicuña), chickens, turkeys, pheasants, and bats. With increasing numbers of complete RV genome sequences becoming available, a standardized RV strain nomenclature system is needed and the RCWG proposes that individual RV strains are named as follows: RV group/species of origin/country of identification/common name/year of identification/G- and P-type. In collaboration with the National Center for Biotechnology Information (NCBI), the RCWG is also working on developing a RV-specific resource for the deposition of nucleotide sequences. This resource will provide useful information regarding RV strains, including but not limited to, the individual gene genotypes, epidemiological, and clinical information. Together, the proposed nomenclature system and the NCBI RV resource will offer highly useful tools for investigators to search for, retrieve, and analyze the ever-growing volume of RV genomic data.
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从稻草色的水果蝙蝠（Eidolon Helvum）中重新分类A轮病毒。
影响因子：
11.8
作者：
Esona MD;Mijatovic-Rustempasic S;Conrardy C;Tong S;Kuzmin IV;Agwanda B;Breiman RF;Banyai K;Niezgoda M;Rupprecht CE;Gentsch JR;Bowen MD
通讯作者：
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