jPOSTrepo: an international standard data repository for proteomes.
jPOSTrepo: an international standard data repository for proteomes.
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DOI：
10.1093/nar/gkw1080
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发表时间：
2017-01-04
影响因子：
14.9
通讯作者：
Ishihama Y
中科院分区：
文献类型：
--
作者：
Okuda S;Watanabe Y;Moriya Y;Kawano S;Yamamoto T;Matsumoto M;Takami T;Kobayashi D;Araki N;Yoshizawa AC;Tabata T;Sugiyama N;Goto S;Ishihama Y
最近在基于质谱的蛋白质组学方面取得了重大进展，产生了越来越多的来自世界各地的各种蛋白质组学项目的数据集。为了促进有前途的数据集的共享和再利用，必须建立适当的高质量公共数据储存库。jPOSTrepo（https：//repository.jpostdb.org/）已经成功实现了几个独特的功能，包括高速文件上传、灵活的文件管理和易于使用的界面。该存储库已作为包含各种蛋白质组数据集的公共存储库启动，可供全球研究人员使用。此外，我们的存储库已加入ProteomeXchange联盟，其中包括最流行的公共存储库，如欧洲的MS/MS数据集的PRIDE和美国的SRM数据集的PASSEL。后来MassIVE被引入美国并被ProteomeXchange接受，就像我们在2016年7月的数据库一样，提供来自亚洲/大洋洲的重要数据集。因此，该存储库有助于全球联盟共享和存储来自各种蛋白质组学实验的所有数据集。因此，该储存库有望成为一个主要的储存库，特别是在亚洲/大洋洲区域收集的数据的储存库。
Major advancements have recently been made in mass spectrometry-based proteomics, yielding an increasing number of datasets from various proteomics projects worldwide. In order to facilitate the sharing and reuse of promising datasets, it is important to construct appropriate, high-quality public data repositories. jPOSTrepo (https://repository.jpostdb.org/) has successfully implemented several unique features, including high-speed file uploading, flexible file management and easy-to-use interfaces. This repository has been launched as a public repository containing various proteomic datasets and is available for researchers worldwide. In addition, our repository has joined the ProteomeXchange consortium, which includes the most popular public repositories such as PRIDE in Europe for MS/MS datasets and PASSEL for SRM datasets in the USA. Later MassIVE was introduced in the USA and accepted into the ProteomeXchange, as was our repository in July 2016, providing important datasets from Asia/Oceania. Accordingly, this repository thus contributes to a global alliance to share and store all datasets from a wide variety of proteomics experiments. Thus, the repository is expected to become a major repository, particularly for data collected in the Asia/Oceania region.
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DOI：
10.1093/database/bat009
发表时间：
2013
期刊：
Database : the journal of biological databases and curation
影响因子：
--
作者：
Mayer G;Montecchi-Palazzi L;Ovelleiro D;Jones AR;Binz PA;Deutsch EW;Chambers M;Kallhardt M;Levander F;Shofstahl J;Orchard S;Vizcaíno JA;Hermjakob H;Stephan C;Meyer HE;Eisenacher M;HUPO-PSI Group
通讯作者：
HUPO-PSI Group
影响因子：
14.9
作者：
Clark K;Karsch-Mizrachi I;Lipman DJ;Ostell J;Sayers EW
通讯作者：
Sayers EW
影响因子：
14.9
作者：
Federhen S
通讯作者：
Federhen S
影响因子：
14.9
作者：
Deutsch EW;Csordas A;Sun Z;Jarnuczak A;Perez-Riverol Y;Ternent T;Campbell DS;Bernal-Llinares M;Okuda S;Kawano S;Moritz RL;Carver JJ;Wang M;Ishihama Y;Bandeira N;Hermjakob H;Vizcaíno JA
通讯作者：
Vizcaíno JA
影响因子：
14.9
作者：
Kolesnikov N;Hastings E;Keays M;Melnichuk O;Tang YA;Williams E;Dylag M;Kurbatova N;Brandizi M;Burdett T;Megy K;Pilicheva E;Rustici G;Tikhonov A;Parkinson H;Petryszak R;Sarkans U;Brazma A
通讯作者：
Brazma A