EuPathDB: a portal to eukaryotic pathogen databases.

EuPathDB: a portal to eukaryotic pathogen databases.
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DOI:
10.1093/nar/gkp941
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发表时间:
2010-01
影响因子:
14.9
通讯作者:
Wang H
Wang H
中科院分区:
生物学2区
文献类型:
--
作者:
Aurrecoechea C;Brestelli J;Brunk BP;Fischer S;Gajria B;Gao X;Gingle A;Grant G;Harb OS;Heiges M;Innamorato F;Iodice J;Kissinger JC;Kraemer ET;Li W;Miller JA;Nayak V;Pennington C;Pinney DF;Roos DS;Ross C;Srinivasamoorthy G;Stoeckert CJ Jr;Thibodeau R;Treatman C;Wang H

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EuPathDB(http:EuPathDB.org;以前的ApiDB)是一个综合数据库,涵盖隐孢子虫属、贾第虫属、利什曼原虫属、新孢子虫属、疟原虫属、弓形虫属、毛滴虫属和锥虫属的真核病原体。虽然这些组中的每一个都由建立在相同基础设施上的特定分类群数据库支持,但EuPathDB门户网站提供了所有这些资源的入口点,并有机会利用正字法进行跨属搜索。EuPathDB的最新版本包括影响数据内容,基础设施和用户界面的更新和更改,改善数据访问并增强用户体验。EuPathDB目前支持80多种搜索,最近实施的“搜索策略”系统使用户能够通过图形界面构建复杂的多步搜索。当策略被构建或修改时,搜索结果被动态显示,并且可以被下载、保存、修改或与其他数据库用户共享。
EuPathDB (http://EuPathDB.org; formerly ApiDB) is an integrated database covering the eukaryotic pathogens of the genera Cryptosporidium, Giardia, Leishmania, Neospora, Plasmodium, Toxoplasma, Trichomonas and Trypanosoma. While each of these groups is supported by a taxon-specific database built upon the same infrastructure, the EuPathDB portal offers an entry point to all these resources, and the opportunity to leverage orthology for searches across genera. The most recent release of EuPathDB includes updates and changes affecting data content, infrastructure and the user interface, improving data access and enhancing the user experience. EuPathDB currently supports more than 80 searches and the recently-implemented ‘search strategy’ system enables users to construct complex multi-step searches via a graphical interface. Search results are dynamically displayed as the strategy is constructed or modified, and can be downloaded, saved, revised, or shared with other database users.
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