What Room for Two-Dimensional Gel-Based Proteomics in a Shotgun Proteomics World?

What Room for Two-Dimensional Gel-Based Proteomics in a Shotgun Proteomics World?
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DOI:
10.3390/proteomes8030017
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发表时间:
2020-08-06
期刊:
影响因子:
3.3
通讯作者:
Rabilloud T
Rabilloud T
中科院分区:
其他
文献类型:
--
作者:
Marcus K;Lelong C;Rabilloud T

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二维凝胶电泳在20世纪80年代后期蛋白质组学的诞生中发挥了重要作用。然而,它现在通常被认为是一个过时的技术,蛋白质组学的过去。虽然这种观点对某些生物学问题可能是正确的,例如,当分析深度至关重要时,对于许多其他人来说,基于二维凝胶电泳的蛋白质组学仍然有很多可以提供的。这是因为它的鲁棒性,分离蛋白质的能力,以及它与许多强大的生物化学技术(包括蛋白质印迹)的简单接口。本文综述了二维凝胶电泳为基础的蛋白质组学仍然可以获利使用的地方和原因。它出现了,而不是成为过去的事情,二维凝胶电泳为基础的蛋白质组学仍然是非常有价值的许多研究。因此,它的使用不能被简单的时尚争论所驳回,而且,像往常一样,在科学中,树是由果实来判断的。
Two-dimensional gel electrophoresis was instrumental in the birth of proteomics in the late 1980s. However, it is now often considered as an outdated technique for proteomics—a thing of the past. Although this opinion may be true for some biological questions, e.g., when analysis depth is of critical importance, for many others, two-dimensional gel electrophoresis-based proteomics still has a lot to offer. This is because of its robustness, its ability to separate proteoforms, and its easy interface with many powerful biochemistry techniques (including western blotting). This paper reviews where and why two-dimensional gel electrophoresis-based proteomics can still be profitably used. It emerges that, rather than being a thing of the past, two-dimensional gel electrophoresis-based proteomics is still highly valuable for many studies. Thus, its use cannot be dismissed on simple fashion arguments and, as usual, in science, the tree is to be judged by the fruit.
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