Comparative characterization of azacytidine-induced RNA and DNA demethylation in myeloid leukemia

粒细胞白血病中氮胞苷诱导的 RNA 和 DNA 去甲基化的比较特征

• 批准号: 171184385
• 负责人: Professor Dr. Frank Lyko
• 金额: --
• 依托单位: Abteilung Epigenetik
• 依托单位国家: 德国
• 项目类别: Priority Programmes
• 财政年份: 2010
• 资助国家: 德国
• 起止时间: 2009-12-31 至 2016-12-31
• 项目状态: 已结题
• 来源: https://gepris.dfg.de/gepris/projekt/171184385?language=en
• 关键词: Comparative; characterization; azacytidine; induced; RNA

The cytosine derivatives 5-azacytidine and decitabine (5-aza-deoxycytidine) function as inhibitors of DNA methyltransferases and are increasingly used for the treatment of myeloid leukemias. However, clinical drug resistances are frequently observed and the extended mode of action of these drugs remains poorly characterized. During the first funding period, we have used array-based methylation profiling to analyze genomic methylation patterns during myeloid differentiation and during the treatment of myeloid leukemia cells with 5-azacytidine and decitabine and decitabine. We also investigated the function of another 5-azacytidine drug target, the tRNA methyltransferase DNMT2, in considerable detail. Further work focused on the characterization of the factors required for the cellular uptake of 5-azacytidine, which led to the establishment of 5-azacytidine-resistant myeloid leukemia cell lines. These cells were characterized by a number of interesting features, including stable global DNA hypomethylation and a strong suppression of DNMT2 protein expression. We will now identify and characterize cellular factors mediating 5-azacytidine resistance in drug-resistant myeloid leukemia cell lines. We will also further analyze the global hypomethylation observed in 5-azacytidine resistant cells and characterize the role of the RNA methyltransferase DNMT2 in 5-azacytidine resistance. Finally, our findings from preclinical models will be validated in clinical samples through collaborations that were established during the first funding period. Altogether, our results will provide detailed insight into the mechanisms of 5-azacytidine resistance and identify novel candidate biomarkers for patient stratification.

胞嘧啶衍生物5-氮杂胞苷和地西他滨（5-氮杂-脱氧胞苷）作为DNA甲基转移酶的抑制剂起作用，并且越来越多地用于治疗骨髓性白血病。然而，经常观察到临床耐药性，并且这些药物的扩展作用模式仍然很难表征。在第一个资助期内，我们使用基于阵列的甲基化谱分析了髓系分化过程中以及5-氮杂胞苷和地西他滨治疗髓系白血病细胞过程中的基因组甲基化模式。我们还研究了另一个5-氮杂胞苷药物靶点，tRNA甲基转移酶DNMT 2的功能，在相当详细。进一步的工作重点是表征细胞吸收5-氮杂胞苷所需的因素，从而建立了5-氮杂胞苷耐药的骨髓白血病细胞系。这些细胞具有许多有趣的特征，包括稳定的整体DNA低甲基化和对DNMT 2蛋白表达的强烈抑制。 我们现在将鉴定和表征耐药髓系白血病细胞系中介导5-氮杂胞苷耐药的细胞因子。我们还将进一步分析在5-氮杂胞苷抗性细胞中观察到的整体低甲基化，并表征RNA甲基转移酶DNMT 2在5-氮杂胞苷抗性中的作用。最后，我们从临床前模型中获得的发现将通过在第一个资助期内建立的合作在临床样本中得到验证。总之，我们的研究结果将提供详细的深入了解5-氮杂胞苷耐药的机制，并确定新的候选生物标志物的患者分层。