Generation of Potato Sequence and Annotation Resources

马铃薯序列和注释资源的生成

• 批准号: 0834044
• 负责人: Carol Buell
• 金额: $ 257.86万
• 依托单位: Michigan State University
• 依托单位国家: 美国
• 项目类别: Continuing Grant
• 财政年份: 2007
• 资助国家: 美国
• 起止时间: 2007-09-28 至 2012-09-30
• 项目状态: 已结题
• 来源: https://www.nsf.gov/awardsearch/showAward?AWD_ID=0834044&HistoricalAwards=false
• 关键词: Generation; Potato; Sequence; Annotation; Resources

PI: C. Robin Buell (Institute for Genomic Research)CO-PIs: Shelley H. Jansky (USDA-ARS), Bernd M. Lange (Washington State University)This project is focused on generating genomic resources for potato (Solanum tuberosum L.). Through participation in the international Potato Genome Sequencing Consortium (PGSC), it will generate Genome Survey Sequences and a draft sequence of chromosome VI. This sequence, along with other potato genome sequence generated by the PGSC, will be annotated for genes and other features, and made available through a web-based portal for scientists to enable scientists to further their work on potato biology and production. Under-represented undergraduates will be trained through a project specific internship program. The general public will be educated in genomics through an educational exhibit in collaboration with the US Botanical Garden that demonstrates challenges in potato and agricultural production and how science, including genomics, can meet these challenges. Access to project outcomesSequence data from this project will be made available to the public through Genbank (http://www.ncbi.nih.gov/Genbank/index.html) and the project website (accessible through http://www.tigr.org/plantProjects.shtml) and annotation data will be made available through the project website.

PI：C。Robin Buell（基因组研究所）CO-PI：Shelley H. Jansky（USDA-ARS），Bernd M.兰格（华盛顿州立大学）该项目的重点是产生马铃薯（Solanum tuberosum L.）的基因组资源。通过参与国际马铃薯基因组测序联盟（PGSC），它将产生基因组调查序列和染色体VI的序列草案。这个序列，沿着由PGSC产生的其他马铃薯基因组序列，将被注释基因和其他特征，并通过基于网络的门户网站提供给科学家，使科学家能够进一步研究马铃薯生物学和生产。代表性不足的本科生将通过项目具体实习计划进行培训。公众将通过与美国植物园合作的教育展览接受基因组学教育，该展览展示了马铃薯和农业生产中的挑战以及包括基因组学在内的科学如何应对这些挑战。该项目的序列数据将通过Genbank（http：//www.ncbi.nih.gov/Genbank/index.html）和项目网站（可通过http：//www.tigr.org/plantProjects.shtml访问）向公众提供，注释数据将通过项目网站提供。