课题基金 / 基金详情

Collaborative Research: An Integrated Experimental and Computational Approach to Discover Biomechanical Mechanisms of Leaf Epidermal Morphogenesis

Collaborative Research: An Integrated Experimental and Computational Approach to Discover Biomechanical Mechanisms of Leaf Epidermal Morphogenesis
合作研究:探索叶表皮形态发生生物力学机制的综合实验和计算方法
批准号:
1715544
负责人:
Daniel Szymanski
金额:
$91.41万
依托单位:
依托单位国家:
美国
项目类别:
Standard Grant
财政年份:
2017
资助国家:
美国
项目状态:
已结题
起止时间:
2017-08-01 至 2023-07-31

项目摘要

项目成果

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中文摘要
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英文摘要
The size and shape of leaves are important agricultural traits that strongly influence crop yield. The growth of individual cells collectively determine leaf morphology, and a major challenge in biology is to understand how cellular constituents pattern the cell wall to influence local rates and directions of cell growth. This project focuses on discovering the growth control mechanisms of the outer layer of cells that form the leaf epidermis. The epidermis serves both as a waterproof layer that protects the leaf and as a growing biomechanical shell that influences the size and shape of the leaf. This project aims to understand how cell signaling and cytoskeletal patterning is controlled among adherent cells and how local growth can scale to influence tissue or whole leaf traits. The Broader Impact activities include interdisciplinary training for all members of the team (including undergraduates and high school students). A K-12 summer camp module will also be developed for the Young Nebraska Scientist Program. The Arabidopsis leaf epidermal morphogenesis system is ideally suited for major breakthroughs. However, progress has been slow because of the lack of reliable phenotyping methods to define genetic pathways and analyze the non-intuitive biomechanical interactions that occur among the cytoskeleton, cell wall, and cell geometry. The interdisciplinary research team will create a new experimental and computational approach to discover how microtubule-dependent patterning of cellulose microfibrils drives polarized growth in the epidermis. The resulting computational models will make predictions about the how cells generate the spatial and temporal heterogeneities in the cell wall that drive interdigitated growth of these jig-saw-puzzle shaped cells. Importantly, biomechanical feedback control of the cell wall on the microtubule cytoskeleton is a general feature of plant development. The proposed research will generate data and create integrated computational models that reveal how cell wall stress patterns influence cortical microtubules and tissue morphogenesis.
期刊论文(11)
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会议论文
DOI: 10.1016/j.cub.2018.05.076
发表时间: 2018-08
期刊: Current Biology
影响因子: 9.2
作者: [M. Yanagisawa;J. Alonso;D. Szymanski]
通讯作者: M. Yanagisawa;J. Alonso;D. Szymanski
Accurate 3D Cell Segmentation using Deep Feature and CRF Refinement
使用深度特征和 CRF 细化进行准确的 3D 细胞分割
DOI: --
发表时间: 2018
期刊: IEEE Signal Processing Society
影响因子: --
作者: [Jiang, Jianxiang]
通讯作者: Jiang, Jianxiang
DOI: 10.1104/pp.17.01554
发表时间: 2018-01-01
期刊: PLANT PHYSIOLOGY
影响因子: 7.4
作者: [Belteton, Samuel A., Sawchuk, Megan G., Szymanski, Daniel B.]
通讯作者: Szymanski, Daniel B.
DOI: 10.1104/pp.17.01519
发表时间: 2018-01-01
期刊: PLANT PHYSIOLOGY
影响因子: 7.4
作者: [Szymanski, Dan, Staiger, Christopher J.]
通讯作者: Staiger, Christopher J.
7
    Transitions: Creating a Trans-Disciplinary Approach to Discover Multi-Scale Control Mechanisms of Plant Morphogenesis
    • 批准号:
      2148122
    • 项目类别:
      Continuing Grant
    • 资助金额:
      $74.99万
    • 财政年份:
      2022
    • 负责人:
      Daniel Szymanski
    • 依托单位:
    RESEARCH-PGR: A Systems Biology Approach to Enable Cotton Fiber Engineering
    • 批准号:
      1951819
    • 项目类别:
      Standard Grant
    • 资助金额:
      $229.8万
    • 财政年份:
      2020
    • 负责人:
      Daniel Szymanski
    • 依托单位:
    2018 Plant Cell Dynamics (PCD) Meeting; May 29-June 1, 2018; University of Wisconsin-Madison
    • 批准号:
      1834879
    • 项目类别:
      Standard Grant
    • 资助金额:
      $1.2万
    • 财政年份:
      2018
    • 负责人:
      Daniel Szymanski
    • 依托单位:
    Conference: Plant Cell Dynamics 2017; May 30-June 2; Madison, WI
    • 批准号:
      1738300
    • 项目类别:
      Standard Grant
    • 资助金额:
      $1.24万
    • 财政年份:
      2017
    • 负责人:
      Daniel Szymanski
    • 依托单位:
    国内基金
    海外基金
    Research on Quantum Field Theory without a Lagrangian Description
    • 批准号:
      24ZR1403900
    • 项目类别:
      省市级项目
    • 资助金额:
      --
    • 批准年份:
      2024
    • 负责人:
      SATOSHI NAWATA
    • 依托单位:
    Cell Research
    Cell Research
    Cell Research (细胞研究)