Collaborative Research: Comparative ecology of a keystone pathogen in dynamics of a vegetated coastal ecosystem

合作研究：沿海植被生态系统动态中关键病原体的比较生态学

• 批准号: 1829992
• 负责人: John Stachowicz
• 金额: $ 23.12万
• 依托单位: University of California-Davis
• 依托单位国家: 美国
• 项目类别: Standard Grant
• 财政年份: 2018
• 资助国家: 美国
• 起止时间: 2018-09-01 至 2023-08-31
• 项目状态: 已结题
• 来源: https://www.nsf.gov/awardsearch/showAward?AWD_ID=1829992&HistoricalAwards=false
• 关键词: Collaborative; Research; Comparative; ecology; keystone

Pathogens may be unrecognized key species in many ecosystems, causing massive impacts on other species and habitats despite the microscopic size of disease-causing organisms. Yet the triggers to disease epidemics likely involve complex interactions among changing environmental conditions and associated biological communities. In the ocean, understanding disease outbreaks has been hindered by inadequate knowledge of how these various influences interact to determine susceptibility and resilience to disease. This project integrates research in community and disease ecology with microbial genomics, geospatial analysis, and state-of-the-art computational approaches toward an unprecedented understanding of the causes and consequences of wasting disease in eelgrass, an important vegetation type supporting coastal and estuarine ecosystems throughout the northern hemisphere. The research advances frontiers in understanding the growing but poorly appreciated threat of marine diseases, how disease ecology interacts with environmental change, and its consequences for the extensive ecosystems and coastal communities that depend on eelgrass, across 23 degrees of latitude along the Pacific coast of North America. The research will inform better management of threatened seagrass ecosystems, which provide important services including fisheries habitat, erosion control, carbon storage, and capture of nutrient runoff. The research will foster integrative approaches in the next generation, including high school students, undergraduates, graduate students, and postdocs working on the project, and each investigator's institution will work to recruit participants from under-represented groups. Best practices developed under this award, including the Eelisa disease app and drone mapping, will be disseminated for broader surveillance of seagrass disease and coastal habitat quality by both professional and citizen scientists in coordination with the Global Ocean Observing System's (GOOS) develpoment of seagrass extent as an Essential Ocean Variable.The triggers to marine disease epidemics are likely complex, and progress in understanding them has been hindered by a poor understanding of the multifaceted ecological context of the host-disease interaction. This project's overarching goal is to disentangle the web of direct and indirect interactions by which changing climate mediates prevalence of eelgrass wasting disease, and its consequences for threatened but important eelgrass ecosystems. The centerpiece is a comparative, cross-scale survey of eelgrass community composition, microbiome, and disease prevalence along thermal gradients of latitude and exposure to the ocean, providing the first coast-wide picture of disease dynamics in response to environmental change. In situ sampling will be linked to dynamics of eelgrass at landscape scales using unmanned aerial systems (drones) to quantify high-resolution changes in eelgrass extent and habitat quality. Experiments will test how the diverse biological community mediates impacts of the pathogen on eelgrass ecosystems.This award reflects NSF's statutory mission and has been deemed worthy of support through evaluation using the Foundation's intellectual merit and broader impacts review criteria.

病原体可能是许多生态系统中未被认识到的关键物种，尽管致病生物体的体积很小，但对其他物种和栖息地造成了巨大影响。然而，疾病流行的触发因素可能涉及不断变化的环境条件和相关生物群落之间的复杂相互作用。在海洋中，由于对这些各种影响如何相互作用以确定对疾病的易感性和复原力的了解不足，因此对疾病爆发的了解受到阻碍。该项目将社区和疾病生态学研究与微生物基因组学，地理空间分析和最先进的计算方法相结合，以前所未有地了解鳗鱼草中浪费疾病的原因和后果，鳗鱼草是支持整个北方半球沿海和河口生态系统的重要植被类型。这项研究在了解海洋疾病日益增长但很少受到重视的威胁，疾病生态学如何与环境变化相互作用，以及其对依赖于鳗鱼草的广泛生态系统和沿海社区的影响方面取得了进展，横跨北美太平洋沿岸沿着纬度23度。这项研究将为更好地管理受威胁的海草生态系统提供信息，海草生态系统提供重要服务，包括渔业栖息地、侵蚀控制、碳储存和养分径流捕获。该研究将促进下一代的综合方法，包括高中生，本科生，研究生和从事该项目的博士后，每个研究机构将努力从代表性不足的群体中招募参与者。根据该奖项开发的最佳做法，包括Eelisa疾病应用程序和无人机绘图，将与全球海洋观测系统（GOOS）协调，由专业和公民科学家更广泛地监测海草疾病和沿海栖息地质量。对宿主-疾病相互作用的多方面生态背景的理解不足，阻碍了对它们的理解。该项目的总体目标是解开直接和间接相互作用的网络，通过这种相互作用，气候变化介导了鳗草消耗病的流行，及其对受威胁但重要的鳗草生态系统的后果。核心是比较，跨尺度调查的鳗草群落组成，微生物组，疾病流行沿着纬度和暴露于海洋的热梯度，提供了第一个沿海地区的疾病动态响应环境变化的图片。原位采样将与在景观尺度上使用无人驾驶航空系统（无人机），以量化高分辨率的变化，在鳗鱼草的范围和栖息地质量的动态。实验将测试不同的生物群落如何介导病原体对鳗草生态系统的影响。该奖项反映了NSF的法定使命，并通过使用基金会的知识价值和更广泛的影响审查标准进行评估，被认为值得支持。

项目成果

Low‐Altitude UAV Imaging Accurately Quantifies Eelgrass Wasting Disease From Alaska to California

• DOI: 10.1029/2022gl101985
• 发表时间: 2023-02
• 期刊: Geophysical Research Letters
• 影响因子: 5.2
• 作者: Bo Yang;Timothy L. Hawthorne;Lillian R. Aoki;Deanna S. Beatty;Tyler Copeland;Lia K. Domke;G. Eckert;Carla P. Gomes;Olivia J. Graham;C. D. Harvell;Kevin A. Hovel;M. Hessing‐Lewis;Leah M. Harper;Ryan S. Mueller;B. Rappazzo;L. Reshitnyk;J. Stachowicz;F. Tomas;J. E. Duffy

Disease surveillance by artificial intelligence links eelgrass wasting disease to ocean warming across latitudes

• DOI: 10.1002/lno.12152
• 发表时间: 2022-05-27
• 期刊: LIMNOLOGY AND OCEANOGRAPHY
• 影响因子: 4.5
• 作者: Aoki, Lillian R.;Rappazzo, Brendan;Harvell, C. Drew
• 通讯作者: Harvell, C. Drew

Northeast Pacific eelgrass fish communities characterized by environmental DNA represent local diversity and show habitat specificity

以环境 DNA 为特征的东北太平洋鳗草鱼群落代表了当地多样性并表现出栖息地特异性

• DOI: 10.1002/edn3.431
• 发表时间: 2023
• 期刊: Environmental DNA
• 作者: Beatty, Deanna S.;Deen, Emma;Gross, Collin;Stachowicz, John J.
• 通讯作者: Stachowicz, John J.