RoL: FELS: EAGER: Collaborative Research: Genomics of exceptions to scaling of longevity to body size
RoL: FELS: EAGER: Collaborative Research: Genomics of exceptions to scaling of longevity to body size
批准号:
1838283
负责人:
David Ray
金额:
$15.19万
依托单位:
依托单位国家:
美国
项目类别:
Standard Grant
财政年份:
2018
资助国家:
美国
项目状态:
已结题
起止时间:
2018-09-01 至 2021-12-31
中文摘要
点击翻译按钮获取中文摘要
英文摘要
In mammals, as body size increases so does maximum lifespan, but bats represent an exception to this rule. This project will use a detailed genomic analysis to examine how bats live significantly longer than expected. Bat species studied to date can live up to six times longer than expected based on their body mass. Achieving unusually long life requires enhanced cell and tissue upkeep, maintaining immune function, and avoiding mutations that cause cancer and other age-related diseases. Hence, their exceptionally long lives require that bats evolve mechanisms to enable these features. To discover the genetic basis of healthy old age, this project focuses on pairs of closely related bat species that sharply differ in their longevity. Detailed genome comparisons between closely related species with different life spans will test different theories of aging. Although genome sequences are available for many mammals, including some bats, in most cases these are too incomplete to allow detailed comparisons. For this reason, the project also seeks to combine modern DNA sequencing techniques to produce genome sequences at greater resolution and lower cost than hitherto possible. The resulting methods can be applied across many other mammals, and vertebrates more generally. The project will also support the production of new teaching materials on evolutionary biology for secondary school students and research experiences for teachers, as well as the development of new research and analytical approaches for use by the scientific community.The scaling of longevity by body size relates the biology of populations to the molecular mechanisms of cells and tissues making up individuals, but the nature of the connections is debated. Some theories suggest that aging is the result of genetic trade-offs imposed by the diminishing chances of reproduction of older individuals (Evolutionary Theory), while others propose that aging results from molecular and cellular damage as organisms move through life (Damage Theory). This project will test these broad theories through comparative analyses of high-quality genome sequences. Besides generating at least five high quality mammalian genomes to complement existing or ongoing ones, the project will relate longevity phenotypes to genotypes across the genome sequence including genes, pseudogenes, transcription factors, and variation in the number of copies of certain genes. Coupled with analyses of genomic methylation and RNA transcripts, the project will identify candidate regions underlying divergent longevities, enabling future functional analyses at the scale of tissues, cells, and molecules.This award reflects NSF's statutory mission and has been deemed worthy of support through evaluation using the Foundation's intellectual merit and broader impacts review criteria.
期刊论文(8)
专著(0)
科研奖励(0)
会议论文
DOI:
10.1093/gbe/evz269
发表时间:
2020-01-01
期刊:
GENOME BIOLOGY AND EVOLUTION
影响因子:
3.3
作者:
[Ghosh, Arnab, Johnson, Matthew G., Ray, David A.]
通讯作者:
Ray, David A.
Simultaneous TE Analysis of 19 Heliconiine Butterflies Yields Novel Insights into Rapid TE-Based Genome Diversification and Multiple SINE Births and Deaths
对 19 只 Heliconiine 蝴蝶进行同步 TE 分析,对基于 TE 的基因组快速多样化和多个 SINE 出生和死亡产生新的见解
DOI:
10.1093/gbe/evz125
发表时间:
2019
期刊:
Genome Biology and Evolution
影响因子:
3.3
作者:
[Ray, David A, Grimshaw, Jenna R, Halsey, Michaela K, Korstian, Jennifer M, Osmanski, Austin B, Sullivan, Kevin A, Wolf, Kristen A, Reddy, Harsith, Foley, Nicole, Stevens, Richard D]
通讯作者:
Stevens, Richard D
DOI:
10.1016/j.ab.2020.113781
发表时间:
2020-08-01
期刊:
ANALYTICAL BIOCHEMISTRY
影响因子:
2.9
作者:
[Ghosh, Arnab, Platt, Roy N., II, Ray, David A.]
通讯作者:
Ray, David A.
Circadian iron metabolism, implications for health, and response to inflammatory disease.
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批准号:MR/W019000/1
-
项目类别:Research Grant
-
资助金额:$92.04万
-
财政年份:2022
-
负责人:David Ray
-
依托单位:
BUD23 drives system-wide adaptations to energy metabolism
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批准号:MR/V034049/1
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项目类别:Research Grant
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资助金额:$91.27万
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财政年份:2021
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负责人:David Ray
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依托单位:
RAPID: Collaborative Research: Immunological adaptations in bats to moderate the effect of coronavirus infection
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批准号:2032006
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项目类别:Standard Grant
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资助金额:$10.51万
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财政年份:2020
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负责人:David Ray
-
依托单位:
Conference: FASEB Science Research Conference on Mobile DNA: 25 Years of Discussion and Research, June 23-29, 2019, Palm Springs, CA
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批准号:1915810
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项目类别:Standard Grant
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资助金额:$0.72万
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财政年份:2019
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负责人:David Ray
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依托单位:
Inflammatory therapeutics and the role of the circadian clock
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批准号:MR/P023576/2
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项目类别:Research Grant
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资助金额:$221.96万
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财政年份:2018
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负责人:David Ray
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依托单位:
Exploitation of metadherin as a regulator of hepatic energy metabolism
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批准号:MR/P011853/2
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项目类别:Research Grant
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资助金额:$43.13万
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财政年份:2018
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负责人:David Ray
-
依托单位:
Exploitation of metadherin as a regulator of hepatic energy metabolism
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批准号:MR/P011853/1
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项目类别:Research Grant
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资助金额:$87.45万
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财政年份:2017
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负责人:David Ray
-
依托单位:
Inflammatory therapeutics and the role of the circadian clock
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批准号:MR/P023576/1
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项目类别:Research Grant
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资助金额:$257.03万
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财政年份:2017
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负责人:David Ray
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依托单位:
Advancing therapeutics by exploiting single cell functional analysis
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批准号:MR/M008908/1
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项目类别:Research Grant
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资助金额:$626.42万
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财政年份:2015
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负责人:David Ray
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依托单位:
Collaborative Research: SG: piRNA Dynamics in the Absence of Active Transposable Elements
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批准号:1355176
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项目类别:Standard Grant
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资助金额:$5.59万
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财政年份:2014
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负责人:David Ray
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依托单位:
MICA: Epigenetic regulation of GR function in pulmonary inflammation: the role of MERM1
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批准号:MR/L010240/1
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项目类别:Research Grant
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资助金额:$81.28万
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财政年份:2014
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负责人:David Ray
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依托单位:
Analysis of the pulmonary GR interactome, and functional validation.
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批准号:MR/L00254X/1
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项目类别:Research Grant
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资助金额:$83.4万
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财政年份:2014
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负责人:David Ray
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依托单位:
Completing the Crocodilian Triumvirate: A Genome Draft for the Indian Gharial
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批准号:1052500
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项目类别:Standard Grant
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资助金额:$8.5万
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财政年份:2011
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负责人:David Ray
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依托单位:
COLLABORATIVE RESEARCH: A Novel Phylogenetic Approach to the Analysis of Bat Phylogenetics and Morphological Evolution
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批准号:1020865
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项目类别:Standard Grant
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资助金额:$13.49万
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财政年份:2010
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负责人:David Ray
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依托单位:
海外基金