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EarthCube Data Capabilities: Collaborative Research: Integration of Reproducibility into Community Cyberinfrastructure

EarthCube Data Capabilities: Collaborative Research: Integration of Reproducibility into Community Cyberinfrastructure
EarthCube 数据能力:协作研究:将可重复性集成到社区网络基础设施中
批准号:
1928288
负责人:
Tanu Malik
金额:
$33.19万
依托单位:
依托单位国家:
美国
项目类别:
Standard Grant
财政年份:
2019
资助国家:
美国
项目状态:
已结题
起止时间:
2019-09-01 至 2024-08-31

项目摘要

项目成果

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中文摘要
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英文摘要
For science to reliably support new discoveries, its results must be reproducible. This has proven to be a challenge in many fields including, most notably, fields that rely on computational studies as a means for supporting new discoveries. Reproducibility in these studies is particularly difficult because they require open sharing of data and models and careful control by the original researcher. This is to ensure that products can be run on later generations of hardware and software and produce consistent results. This project will develop software that helps support computational reproducibility and makes it easier and more efficient for geoscientists to preserve, share, repeat and replicate scientific computations. The Broader Impacts of this project include a collaboration between computer scientists, hydrologists and the Consortium of Universities for the Advancement of Hydrologic Science Inc. (CUAHSI) for the hydrology research community. With over 3500 users, and holding over 8000 model and data resources, this collaboration will bring improved tools and best practices to a broad and diverse community of geoscientists. Beyond hydrology, the methods and tools developed as part of this project have the potential to be extended to the solid Earth and space science geoscience domains. They also have the potential to inform the reproducibility evaluation process as currently undertaken by journals and publishers. The projct will also conduct workshops to train researchers and be used in the classroom at Utah Sate Universtiy, DePaul University and the University of Virginia. Emphasis on the importance of research reproducibility is steadily rising, however many studies still continue to not be reproducible. Reproducibility in computational studies is particularly difficult because of the challenges involved in completely documenting the data, models and procedures used together with the underlying hardware and software dependencies. The reproducibility workbench software (ReproBench) developed in this project will address reproducibility questions by establishing a container-based reproducible workflow that will make it easy and efficient for geoscientists to verify scientific results. Automation and documentation are two key methods for improving verification and, in general, the conduct of reproducible science. This project will build-from past investments: (I) automated containerization methods, through the Sciunit project, and (II) well-documented, community-adopted interfaces, through HydroShare, and bring these investments together to establish a novel, robust, and reproducible workflow. By applying this workflow to water-related science use cases, this project will demonstrate how to preserve, share, repeat, and replicate scientific results. The interfaces can become an exemplar for other community cyberinfrastructure that, akin to Hydrology, aims to share data and models at a large scale. In establishing this workflow, the ReproBench project team combines expertise in cyberinfrastructure, domain science, and reproducible computational data science. By leveraging Sciunit, ReproBench brings formal methods for the conduct of reproducible computational science into the geosciences.This award reflects NSF's statutory mission and has been deemed worthy of support through evaluation using the Foundation's intellectual merit and broader impacts review criteria.
期刊论文(7)
专著(0)
科研奖励(0)
会议论文
Provenance-based Workflow Diagnostics Using Program Specification
使用程序规范进行基于来源的工作流程诊断
DOI: --
发表时间: 2022
期刊: and Analytics
影响因子: --
作者: [Nakamura, Y. Malik]
通讯作者: Nakamura, Y. Malik
Efficient Provenance Alignment in Reproduced Executions
复制执行中的高效出处对齐
DOI: --
发表时间: 2020
期刊: USENIX Theory and Practice of Provenance
影响因子: --
作者: [Y. Nakamura, T. Malik]
通讯作者: Y. Nakamura, T. Malik
A taxonomy for reproducible and replicable research in environmental modelling
环境建模中可重复和可复制研究的分类法
DOI: 10.1016/j.envsoft.2020.104753
发表时间: 2020
期刊: Environmental Modelling & Software
影响因子: 4.9
作者: [Essawy, Bakinam T., Goodall, Jonathan L., Voce, Daniel, Morsy, Mohamed M., Sadler, Jeffrey M., Choi, Young Don, Tarboton, David G., Malik, Tanu]
通讯作者: Malik, Tanu
Artifact Description/Artifact Evaluation: A Reproducibility Bane or a Boon
工件描述/工件评估:可重复性的祸根或福音
DOI: 10.1145/3456287.3465479
发表时间: 2021
期刊: 4th International Workshop on Practical Reproducible Evaluation of Computer Systems
影响因子: --
作者: [Malik, Tanu]
通讯作者: Malik, Tanu
6
    CAREER: Advanced Containers for Reproducibility in Computational and Data Science
    • 批准号:
      1846418
    • 项目类别:
      Continuing Grant
    • 资助金额:
      $49.89万
    • 财政年份:
      2019
    • 负责人:
      Tanu Malik
    • 依托单位:
    EarthCube Building Block: GeoDataspace: Simplifying Data Management for Geoscience Models
    • 批准号:
      1722152
    • 项目类别:
      Standard Grant
    • 资助金额:
      $20.92万
    • 财政年份:
      2016
    • 负责人:
      Tanu Malik
    • 依托单位:
    EarthCube Building Blocks: Collaborative Proposal: GeoTrust: Improving Sharing and Reproducibility of Geoscience Applications
    • 批准号:
      1639759
    • 项目类别:
      Standard Grant
    • 资助金额:
      $78.4万
    • 财政年份:
      2016
    • 负责人:
      Tanu Malik
    • 依托单位:
    EarthCube IA: Collaborative Proposal: Integrated GeoScience Observatory
    • 批准号:
      1661918
    • 项目类别:
      Standard Grant
    • 资助金额:
      $8.3万
    • 财政年份:
      2016
    • 负责人:
      Tanu Malik
    • 依托单位:
    国内基金
    海外基金
    Scalable Learning and Optimization: High-dimensional Models and Online Decision-Making Strategies for Big Data Analysis
    Data-driven Recommendation System Construction of an Online Medical Platform Based on the Fusion of Information
    Development of a Linear Stochastic Model for Wind Field Reconstruction from Limited Measurement Data
    • 批准号:
      --
    • 项目类别:
      --
    • 资助金额:
      40万元
    • 批准年份:
      2020
    • 负责人:
      Vikrant Gupta
    • 依托单位:
    基于Linked Open Data的Web服务语义互操作关键技术
    • 批准号:
      61373035
    • 项目类别:
      面上项目
    • 资助金额:
      77.0万元
    • 批准年份:
      2013
    • 负责人:
      冯志勇
    • 依托单位: