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Linking evolutionary processes and taxonomy in the peatmoss group Sphagnum subg. Cuspidata

Linking evolutionary processes and taxonomy in the peatmoss group Sphagnum subg. Cuspidata
将泥炭类泥炭藓亚群的进化过程和分类学联系起来。
批准号:
1928514
负责人:
Arthur Shaw
金额:
$82.0万
依托单位:
依托单位国家:
美国
项目类别:
Standard Grant
财政年份:
2020
资助国家:
美国
项目状态:
已结题
起止时间:
2020-01-01 至 2024-09-30

项目摘要

项目成果

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中文摘要
翻译
泥炭藓(泥炭苔属)覆盖北半球的大片地区,在那里它们有助于调节区域排水模式,在遥远的北方,它们有助于调节永久冻土(永久冻土)的范围。在这些泥炭沼泽主导的泥炭地生态系统中,泥炭藓以部分分解的泥炭的形式储存了大量的碳,并为其他植物、动物和微生物的独特组合创造了环境。据估计有250-400个泥炭苔类物种,但物种的确切数量及其谱系关系仍有待测试。这个项目的重点是物种划分,估计系谱关系,并为泥炭藓一组产生一个新的分类:泥炭草亚组。尖端数据。本科生、研究生和博士后研究人员将接受不同领域和实验室技术的培训,并获得在泥炭沼泽主导的生态系统中工作的实践经验。一系列研讨会和实地课程将吸引专业和业余博物学家参与该项目,一本新的图文并茂的书将向学龄前儿童介绍植物生命的多样性。该项目产生的所有DNA序列数据将存储在公共数据库中,其他研究产品将可免费获取。该项目的主要目的是评估泥炭藓亚属Sphagnum的物种划分、系统发育关系、种间混合和种间/种内基因组结构。尖吻亚属包括约20-25种。该项目涵盖了广泛的地理范围,包括近邻种群、区域集合种群和来自不同大陆的植物,并包括三个完整的部分。第一个目标是使用RADSeq测试在欧洲、北美东部、北美西部、亚洲收集的植物的系统地理结构假说,特别是北美东部和欧洲的植物是否与北美西部和亚洲的植物形成分支姐妹。RADSeq数据将用于划定系统发育物种,包括估计物种之间的遗传混合和种内地理集合种群系统。第二个目的是使用全基因组测序来测试关于物种之间的基因组分化和地理上分离的种群系统的假设,以及物种和种群水平分支之间共享的基因组区域。一个主要目标是评估单倍体配子体19条染色体上共享和分化的基因组区域的物理结构。比较分析将检验物种在与营养需求和水分关系相关的基因方面存在差异的假设,这两个重要的生态位梯度是区分泥炭藻属成员的两个重要生态位梯度。尖端数据。丰富的泥炭藻属基因组资源,包括亚种的参考基因组和遗传图谱,为比较分析提供了便利。尖顶草属(S.falax)。第三个也是最终目标是在亚属的分类修订中整合和合成数据,包括识别关键字、描述、命名修订、插图和分布图。该奖项反映了NSF的法定使命,并通过使用基金会的智力优势和更广泛的影响审查标准进行评估,被认为值得支持。
英文摘要
Peatmosses (genus Sphagnum) cover huge areas of the Northern Hemisphere where they help regulate regional patterns of water drainage, and in the far North, the extent of permafrost (permanently frozen ground). Within these Sphagnum-dominated peatland ecosystems, peatmosses store vast amounts of carbon in the form of partially decomposed peat and create environments for unique assemblages of other plants, animals, and microbes. There are an estimated 250-400 peatmoss species although the exact number of species and their genealogical relationships remain to be tested. This project focuses on species delimitation, estimating genealogical relationships, and producing a new taxonomic classification for one group of peatmosses: Sphagnum subg. Cuspidata. Undergraduates, graduate students and post-doctoral researchers will be trained in diverse field and laboratory techniques and receive hands-on experience working in Sphagnum-dominated peatland ecosystems. A series of workshops and field courses will engage both professional and amateur naturalists in the project, and a new illustrated book will introduce preschool children to the diversity of plant life. All DNA sequence data generated by the project will be deposited in public databases and other research products will be freely accessible.The central aims of this project are to assess species delimitation, phylogenetic relationships, interspecific admixture, and inter- / intra-specific genome structure in Sphagnum, subgenus Cuspidata. Subgenus Cuspidata includes approximately 20-25 species. The project covers a broad range of geographic scales including proximate populations, regional metapopulations, and plants from different continents, and includes three integrated parts. The first aim uses RADSeq to test hypotheses of phylogeographic structure among plants collected in Europe, eastern North America, western North America, Asia, and specifically, whether eastern North American and European plants form a clade sister to plants from western North America and Asia. The RADSeq data will be used to delimit phylogenetic species, including estimates of genetic admixture among species and intraspecific, geographic metapopulation systems. The second aim uses whole genome sequencing to test hypotheses about genomic differentiation among species and geographically disjunct population systems, as well as genomic regions that are shared among species- and population-level clades. A major goal is to assess the physical architecture of shared and differentiated genomic regions across the 19 chromosomes of haploid gametophytes. Comparative analyses will test hypotheses that species differ in genes related to nutrient requirements and water relations, two important niche gradients that differentiate members of Sphagnum subg. Cuspidata. The comparative analyses are facilitated by rich genomic resources available for Sphagnum, including a reference genome and genetic map for a species in subg. Cuspidata (S. fallax). The third and final aim integrates and synthesizes data within a taxonomic revision of the subgenus, including identification keys, descriptions, nomenclatural revisions, illustrations, and distribution maps.This award reflects NSF's statutory mission and has been deemed worthy of support through evaluation using the Foundation's intellectual merit and broader impacts review criteria.
期刊论文(4)
专著(0)
科研奖励(0)
会议论文
DOI: --
发表时间: 2022
期刊: The Bryologist
影响因子: --
作者: [Marta Nieto, S. Robinson, Blanka Aguero, Aaron M. Duffy, Karn Imwattana, K. Hassel, K. Flatberg, H. Stenøien, A. Shkurko, V. Fedosov, A. J. Shaw]
通讯作者: A. J. Shaw
Accessioning and curating the BING peatmoss (Sphagnum) collection into DUKE
  • 批准号:
    2152585
  • 项目类别:
    Standard Grant
  • 资助金额:
    $25.09万
  • 财政年份:
    2022
  • 负责人:
    Arthur Shaw
  • 依托单位:
Digitization TCN: Collaborative Research: Building a global consortium of bryophytes and lichens: keystones of cryptobiotic communities
  • 批准号:
    2001288
  • 项目类别:
    Standard Grant
  • 资助金额:
    $18.72万
  • 财政年份:
    2020
  • 负责人:
    Arthur Shaw
  • 依托单位:
Dimensions: Collaborative Research: Genome structure and adaptive evolution in peatmosses (Sphagnum): ecosystem engineers
  • 批准号:
    1737899
  • 项目类别:
    Standard Grant
  • 资助金额:
    $118.58万
  • 财政年份:
    2017
  • 负责人:
    Arthur Shaw
  • 依托单位:
DISSERTATION RESEARCH: Diversity and Functions of Interactions between the Liverwort Marchantia polymorpha and its Fungal Endophytes
  • 批准号:
    1501826
  • 项目类别:
    Standard Grant
  • 资助金额:
    $2.07万
  • 财政年份:
    2015
  • 负责人:
    Arthur Shaw
  • 依托单位:
国内基金
海外基金
经济复杂系统的非稳态时间序列分析及非线性演化动力学理论
  • 批准号:
    70471078
  • 项目类别:
    面上项目
  • 资助金额:
    15.0万元
  • 批准年份:
    2004
  • 负责人:
    陈平
  • 依托单位: