Collaborative Research: Bacteria surface sensing and biofilm development

合作研究：细菌表面传感和生物膜开发

• 批准号: 2026782
• 负责人: Arvind Gopinath
• 金额: $ 26.75万
• 依托单位: University of California - Merced
• 依托单位国家: 美国
• 项目类别: Standard Grant
• 财政年份: 2020
• 资助国家: 美国
• 起止时间: 2020-09-01 至 2024-08-31
• 项目状态: 已结题
• 来源: https://www.nsf.gov/awardsearch/showAward?AWD_ID=2026782&HistoricalAwards=false
• 关键词: Collaborative; Research; Bacteria; surface; sensing

Bacterial biofilms are multicellular communities that display coordinated collective behaviors and emergent pattern formations. They present an important and outstanding challenge in daily life in view of their prevalence in health and industrial problems such as antimicrobial resistance, infection and biofouling of water pipes and ship hulls, which pose severe economic burdens. Many functions of the cell, including adhesion, migration, and multicellular organization, can be altered by changes in the physical properties of the cellular environment. The physical and molecular mechanisms by which cells sense and respond to physical stimuli are poorly understood. The aim of this proposal is to develop a synthetic hydrogel system and use it for assessing the effects of substrate mechanics on biofilm development. The results of this project will provide insight into mechanisms of biofilm growth and how to control its behavior. Furthermore, this project trains a diverse set of undergraduate and graduate students as well as provides research opportunities for high school teacher interns. Teacher-interns participate in on-going research projects in the lab as well as in laboratory and department seminars to facilitate exchange of ideas on education and research. In addition, they are developing a curriculum, based on their projects, that is applied in their own classrooms.The overarching goal of this project is to determine how physical properties of the cellular microenvironment regulate biofilm development within Myxococcus xanthus. A major limitation in this type of study is a lack of appropriate in vitro materials to quantify the effects of systemic changes in substrate mechanics on biofilm development. This project creates new synthetic hydrogel systems, with well-defined tunable chemical and mechanical properties, and uses them to determine the direct response of cells to specific chemical and mechanical stimuli. Models of bacteria-substrate interactions are tested in unprecedented ways. The project integrates experimental and computational approaches, to build and test predictive models of bacterial biofilm development and the functional roles played by the cellular environment.This award reflects NSF's statutory mission and has been deemed worthy of support through evaluation using the Foundation's intellectual merit and broader impacts review criteria.

细菌生物膜是一种多细胞生物群落，具有协调的集体行为和紧急模式形成。它们在健康和工业问题中普遍存在，如抗菌素耐药性、感染以及水管和船体的生物污染，造成严重的经济负担，因此它们在日常生活中构成了一个重要和突出的挑战。细胞的许多功能，包括粘附，迁移和多细胞组织，可以通过细胞环境的物理性质的变化而改变。细胞感知和响应物理刺激的物理和分子机制知之甚少。该提案的目的是开发一种合成水凝胶系统，并将其用于评估基质力学对生物膜发展的影响。该项目的结果将提供深入了解生物膜生长的机制以及如何控制其行为。此外，该项目还培训了一批多样化的本科生和研究生，并为高中教师实习生提供了研究机会。教师实习生参加正在进行的研究项目在实验室以及在实验室和部门研讨会，以促进教育和研究的思想交流。此外，他们正在开发一个课程，根据他们的项目，这是在自己的classical.The项目的首要目标是确定细胞微环境的物理特性如何调节粘球菌内生物膜的发展。这种类型的研究的一个主要限制是缺乏适当的体外材料来量化基质力学的系统变化对生物膜发育的影响。该项目创建了新的合成水凝胶系统，具有明确的可调化学和机械特性，并使用它们来确定细胞对特定化学和机械刺激的直接反应。细菌-基质相互作用的模型以前所未有的方式进行测试。该项目整合了实验和计算方法，构建和测试细菌生物膜发展的预测模型以及细胞环境所发挥的功能作用。该奖项反映了NSF的法定使命，并通过使用基金会的知识价值和更广泛的影响审查标准进行评估，被认为值得支持。

项目成果

Ambient Fluid Rheology Modulates Oscillatory Instabilities in Filament-Motor Systems

环境流体流变学调节灯丝电机系统中的振荡不稳定性

• DOI: 10.3389/fphy.2022.895536
• 发表时间: 2022
• 期刊: Frontiers in Physics
• 影响因子: 3.1
• 作者: Tamayo, Joshua;Mishra, Anupam;Gopinath, Arvind
• 通讯作者: Gopinath, Arvind

Synchronized oscillations, traveling waves, and jammed clusters induced by steric interactions in active filament arrays

• DOI: 10.1039/d0sm01162b
• 发表时间: 2021-01-28
• 期刊: SOFT MATTER
• 影响因子: 3.4
• 作者: Chelakkot, Raghunath;Hagan, Michael F.;Gopinath, Arvind
• 通讯作者: Gopinath, Arvind