RAPID: Rapid Creation of a Data Product for the World’s Specimens of Horseshoe Bats and Relatives, a Known Reservoir for Coronaviruses

RAPID:为世界马蹄蝠及其亲属(已知的冠状病毒储存库)样本快速创建数据产品

基本信息

  • 批准号:
    2033973
  • 负责人:
  • 金额:
    $ 20万
  • 依托单位:
  • 依托单位国家:
    美国
  • 项目类别:
    Standard Grant
  • 财政年份:
    2020
  • 资助国家:
    美国
  • 起止时间:
    2020-07-01 至 2022-06-30
  • 项目状态:
    已结题

项目摘要

The award to Florida State University will support research contributing to the development of georeferenced, vetted, and versioned data products of the world’s specimens of horseshoe bats and their relatives for use by researchers studying the origins and spread of SARS-like coronaviruses, including the causative agent of COVID-19. Horseshoe bats and other closely related species are reported to be reservoirs of several SARS-like coronaviruses. Species of these bats are primarily distributed in regions where these viruses have been introduced to populations of humans. Currently, data associated with specimens of these bats are housed in natural history collections that are widely distributed both nationally and globally. Additionally, information tying these specimens to localities are mostly vague, or in many instances missing. This decreases the utility of the specimens for understanding the source, emergence, and distribution of SARS-COV-2 and similar viruses. This project will provide quality georeferenced data products through the consolidation of ancillary information linked to each bat specimen, using the extended specimen model. The resulting product will serve as a model of how data in biodiversity collections might be used to address emerging diseases of zoonotic origin. Results from the project will be disseminated widely in opensource journals, at scientific meetings, and via websites associated with the participating organizations and institutions. Support of this project provides a quality resource optimized to inform research relevant to improving our understanding of the biology and spread of SARS-CoV-2. The overall objectives are to deliver versioned data products, in formats used by the wider research and biodiversity collections communities, through an open-access repository; project protocols and code via GitHub and described in a peer-reviewed paper, and; sustained engagement with biodiversity collections throughout the project for reintegration of improved data into their local specimen data management systems improving long-term curation.This RAPID award will produce and deliver a georeferenced, vetted and consolidated data product for horseshoe bats and related species to facilitate understanding of the sources, distribution, and spread of SARS-CoV-2 and related viruses, a timely response to the ongoing global pandemic caused by SARS-CoV-2 and an important contribution to the global effort to consolidate and provide quality data that are relevant to understanding emergent and other properties the current pandemic. This RAPID award is made by the Division of Biological Infrastructure (DBI) using funds from the Coronavirus Aid, Relief, and Economic Security (CARES) Act.This award reflects NSF's statutory mission and has been deemed worthy of support through evaluation using the Foundation's intellectual merit and broader impacts review criteria.
授予佛罗里达州立大学的奖项将支持有助于开发世界马蹄蝙蝠及其亲属标本的地理参考,审查和版本化数据产品的研究,供研究人员研究SARS样冠状病毒的起源和传播,包括COVID-19的病原体。据报道,马蹄蝙蝠和其他密切相关的物种是几种SARS样冠状病毒的宿主。这些蝙蝠的物种主要分布在这些病毒已被引入人类种群的地区。目前,与这些蝙蝠标本相关的数据被保存在自然历史收藏中,这些收藏在全国和全球范围内广泛分布。此外,将这些标本与地点联系起来的信息大多是模糊的,或者在许多情况下是缺失的。这降低了标本对了解SARS-COV-2和类似病毒的来源、出现和分布的效用。该项目将通过使用扩展样本模型合并与每个蝙蝠样本相关的辅助信息,提供高质量的地理参考数据产品。由此产生的产品将作为如何利用生物多样性收集的数据处理新出现的人畜共患病的模式。该项目的成果将在开放源码期刊、科学会议上以及通过与参与组织和机构有关的网站广泛传播。对该项目的支持提供了一个优质的资源,优化了与提高我们对SARS-CoV-2生物学和传播的理解有关的研究。总体目标是通过开放存取存储库,以更广泛的研究和生物多样性收集社区使用的格式提供版本化数据产品;通过GitHub提供项目协议和代码,并在同行评审文件中进行描述;在整个项目期间持续参与生物多样性收集工作,以便将改进的数据重新纳入当地的标本数据管理系统,术语管理。该RAPID奖将为马蹄蝙蝠和相关物种制作和提供地理参考,审查和整合的数据产品,以促进对SARS-CoV-2和相关病毒的来源,分布和传播的理解,及时应对SARS-CoV引起的全球大流行,2,并为全球努力整合和提供与了解当前流行病的紧急和其他特性相关的高质量数据做出了重要贡献。该奖项由生物基础设施部(DBI)使用冠状病毒援助,救济和经济安全(CARES)法案的资金颁发。该奖项反映了NSF的法定使命,并通过使用基金会的知识价值和更广泛的影响审查标准进行评估,被认为值得支持。

项目成果

期刊论文数量(4)
专著数量(0)
科研奖励数量(0)
会议论文数量(0)
专利数量(0)
Collections do not have to Remain Ambiguous Forever: Seven steps to getting the correct people into your data
集合不必永远保持模糊:让正确的人进入数据的七个步骤
  • DOI:
    10.3897/biss.6.91194
  • 发表时间:
    2022
  • 期刊:
  • 影响因子:
    0
  • 作者:
    Groom, Quentin;Bräuchler, Christian;Cubey, Robert;Dillen, Mathias;Huybrechts, Pieter;Kearney, Nicole;Leachman, Siobhan;Paul, Deborah L;Rogers, Heather;Santos, Joaquim
  • 通讯作者:
    Santos, Joaquim
Rapid Creation of a Data Product for the World's Specimens of Horseshoe Bats and Relatives, a Known Reservoir for Coronaviruses.
为世界马蹄蝠及其亲属(已知的冠状病毒储存库)样本快速创建数据产品。
  • DOI:
    10.3897/biss.4.59067
  • 发表时间:
    2020
  • 期刊:
  • 影响因子:
    0
  • 作者:
    Krimmel, Erica;Mast, Austin;Paul, Deborah;Bruhn, Robert;Rios, Nelson;Shorthouse, David
  • 通讯作者:
    Shorthouse, David
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Austin Mast其他文献

Austin Mast的其他文献

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{{ truncateString('Austin Mast', 18)}}的其他基金

ABI DEVELOPMENT: Notes from Nature: Advancing a Next Generation Citizen Science Platform For Biocollection Transcription
ABI 开发:《自然》笔记:推进下一代生物收集转录公民科学平台
  • 批准号:
    1458550
  • 财政年份:
    2015
  • 资助金额:
    $ 20万
  • 项目类别:
    Standard Grant
Digitization TCN: Collaborative Research: The Key to the Cabinets: Building and Sustaining a Research Database for a Global Biodiversity Hotspot
数字化 TCN:协作研究:内阁的关键:为全球生物多样性热点建立和维护研究数据库
  • 批准号:
    1410288
  • 财政年份:
    2014
  • 资助金额:
    $ 20万
  • 项目类别:
    Standard Grant
DISSERTATION RESEARCH: Extending anchored phylogenomics into plants with a case study of beaksedge (tribe Rhynchosporeae; Cyperaceae) diversification in the New World
论文研究:通过新世界喙莎草(Rhynchosporeae 部落;莎草科)多样化的案例研究将锚定系统发育学扩展到植物中
  • 批准号:
    1311150
  • 财政年份:
    2013
  • 资助金额:
    $ 20万
  • 项目类别:
    Standard Grant
Collaborative Research: Imaging the Tall Timbers Research Station's Biological Research Collections
合作研究:对高木研究站的生物研究收藏进行成像
  • 批准号:
    0956372
  • 财政年份:
    2010
  • 资助金额:
    $ 20万
  • 项目类别:
    Standard Grant
Collaborative Research: The Deep South Plant Specimen Imaging Project
合作研究:南方腹地植物标本成像项目
  • 批准号:
    0646222
  • 财政年份:
    2007
  • 资助金额:
    $ 20万
  • 项目类别:
    Continuing Grant
Phylogeny, Biogeography, and Ecological Diversification of Subfamily Grevilleoideae (Proteaceae)
Grevilleoideae 亚科(山龙眼科)的系统发育、生物地理学和生态多样性
  • 批准号:
    0516340
  • 财政年份:
    2005
  • 资助金额:
    $ 20万
  • 项目类别:
    Continuing Grant

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