Collaborative Research: AF: Medium: A Unified Framework for Geometric and Topological Signature-Based Shape Comparison
Collaborative Research: AF: Medium: A Unified Framework for Geometric and Topological Signature-Based Shape Comparison
批准号:
2106578
负责人:
Elizabeth Munch
金额:
$40.99万
依托单位国家:
美国
项目类别:
Continuing Grant
财政年份:
2021
资助国家:
美国
项目状态:
未结题
起止时间:
2021-06-01 至 2025-05-31
中文摘要
数据分析的一个基本方面是比较数据集的能力,以便测量(不)相似性并量化数据中存在的模式。然而,数据通常太大、太复杂,无法对其进行整体分析,因此需要使用不同的技术来总结数据,以便使用更小、更易于管理的数据表示形式。本课题通过数学的视角研究数据比较问题,使用几何和拓扑特征来简洁地表示这些形状。该项目将考虑存在于一些较大的几何或拓扑空间中的各种不同类型的形状数据(例如,GIS轨迹、点集、网格、3d扫描或图形),并考虑可用于简洁地表示这些形状的代数、几何和图形签名类。该项目主要利用了拓扑数据分析这一新兴但发展迅速的领域,将同调或同伦等拓扑工具与几何度量相结合,创建了用于分析数据形状的健壮分析工具。研究生和本科生将紧密地融入该项目,并将特别努力让来自代表性不足群体的学生参与进来。研究小组的其他努力包括规划一个以这一领域的妇女为重点的讲习班,以及在她们自己的大学中扩大多样性和包容性的努力。该项目关注的是在签名之上有一些共同的底层注释框架的形状,这些框架通常是来自原始嵌入的额外结构或几何信息。这项研究包括两个主要部分。首先,研究人员正在对算法和方法进行原则性研究,以开发一个统一的框架,该框架利用多个签名进行形状比较。这一阶段的目标是提供理论结果以及对各种数据集和签名的实证评估。该项目的第二个主要组成部分研究逆问题,旨在从签名组合中重建形状。这些问题对于几何或拓扑签名来说是非常困难的,因为它们必然是有损的,并且会删除某些类型的信息。在项目过程中,研究人员还开发了一个形状签名工具包,可以计算一系列签名和距离,将现有的距离概念和在项目过程中开发的新概念添加到软件中。该项目由算法基础核心计划和建立计划刺激竞争研究(EPSCoR)共同资助。该奖项反映了美国国家科学基金会的法定使命,并通过使用基金会的知识价值和更广泛的影响审查标准进行评估,被认为值得支持。
英文摘要
A fundamental aspect for data analysis is the ability to compare data sets, in order to measure (dis)similarity and quantify patterns present in the data. However, data is often too large and complex to analyze in its entirety, and therefore different techniques are used to summarize the data in order to work with smaller, more manageable representations of it. This project studies the data-comparison problem through the lens of mathematics, using geometric and topological signatures to represent these shapes concisely. This project will consider a variety of different kinds of shape data which live in some larger geometric or topological space (e.g., GIS trajectories, point sets, meshes, 3d scans, or graphs), and consider classes of algebraic, geometric, and graphical signatures which can be used to represent these shapes concisely. The project draws primarily upon the nascent yet rapidly developing area of topological data analysis, where tools from topology like homology or homotopy are combined with geometric measures to create robust analysis tools for analyzing the shape of data. Graduate and undergraduate students will be tightly integrated into the project, and special efforts will be made to involve students from underrepresented groups. Additional efforts by the research team include planning a workshop focused on women in this field, as well as broadening diversity and inclusion efforts in their own universities.The project focuses on shapes that have some common underlying annotation framework on top of the signature, which is usually additional structural or geometric information from the original embedding. The research consists of two major components. In the first, the investigators are initiating a principled study of algorithms and approaches to develop a unified framework which leverages multiple signatures for shape comparison. The goal of this phase is to provide theoretical results as well as empirical evaluations on a variety of data sets and signatures. The second major component of the project studies inverse problems, which aim to reconstruct shapes from a combination of signatures. Such problems are notoriously difficult for geometric or topological signatures, as they are necessarily lossy and remove certain types of information. During the course of the project, the investigators are also developing a shape signatures toolkit that enables computation of a range of signatures and distances, adding to the software both existing notions of distance and new ones developed over the course of the project.This project is jointly funded by the Algorithmic Foundations Core Program and by the Established Program to Stimulate Competitive Research (EPSCoR).This award reflects NSF's statutory mission and has been deemed worthy of support through evaluation using the Foundation's intellectual merit and broader impacts review criteria.
期刊论文(5)
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DOI:
10.1007/s44007-022-00037-8
发表时间:
2023-01
期刊:
La Matematica
影响因子:
--
作者:
[M. Buchin;E. Chambers;Pan Fang;Brittany Terese Fasy;Ellen Gasparovic;E. Munch;C. Wenk]
通讯作者:
M. Buchin;E. Chambers;Pan Fang;Brittany Terese Fasy;Ellen Gasparovic;E. Munch;C. Wenk
DOI:
10.1002/ppj2.20095
发表时间:
2024-02
期刊:
The Plant Phenome Journal
影响因子:
--
作者:
[Erik J. Amézquita;Michelle Y. Quigley;Patrick J. Brown;Elizabeth Munch;D. Chitwood]
通讯作者:
Erik J. Amézquita;Michelle Y. Quigley;Patrick J. Brown;Elizabeth Munch;D. Chitwood
DOI:
10.1093/insilicoplants/diab033
发表时间:
2022-01-01
期刊:
IN SILICO PLANTS
影响因子:
3.1
作者:
[Amezquita, Erik J., Quigley, Michelle Y., Chitwood, Daniel H.]
通讯作者:
Chitwood, Daniel H.
The shape of aroma: Measuring and modeling citrus oil gland distribution
香气的形状:柑橘油腺分布的测量和建模
DOI:
10.1002/ppp3.10333
发表时间:
2022
期刊:
PLANET
影响因子:
--
作者:
[Amézquita, Erik J., Quigley, Michelle Y., Ophelders, Tim, Seymour, Danelle, Munch, Elizabeth, Chitwood, Daniel H.]
通讯作者:
Chitwood, Daniel H.
DOI:
10.1140/epjds/s13688-023-00379-5
发表时间:
2022-05
期刊:
EPJ Data Science
影响因子:
3.6
作者:
[Audun D. Myers;Firas A. Khasawneh;E. Munch]
通讯作者:
Audun D. Myers;Firas A. Khasawneh;E. Munch
CAREER: Reeb graph learning: Classification, Clustering, and Embedding of Graphical Signatures
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批准号:2142713
-
项目类别:Continuing Grant
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资助金额:$50.75万
-
财政年份:2022
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负责人:Elizabeth Munch
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依托单位:
AF: Small: Collaborative Research: Reeb graph flows: Metrics, Drawings, and Analysis
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批准号:1907591
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项目类别:Standard Grant
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资助金额:$24.66万
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财政年份:2019
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负责人:Elizabeth Munch
-
依托单位:
CDS&E: Collaborative Research: Machine Learning on Dynamical Systems via Topological Features
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批准号:1800446
-
项目类别:Standard Grant
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资助金额:$10.17万
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财政年份:2017
-
负责人:Elizabeth Munch
-
依托单位:
Collaborative Research: A Unified Framework for the Investigation of Time Series Using Topological Data Analysis
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批准号:1800466
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项目类别:Standard Grant
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资助金额:$14.34万
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财政年份:2017
-
负责人:Elizabeth Munch
-
依托单位:
Collaborative Research: A Unified Framework for the Investigation of Time Series Using Topological Data Analysis
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批准号:1562012
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项目类别:Standard Grant
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资助金额:$17.87万
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财政年份:2016
-
负责人:Elizabeth Munch
-
依托单位:
CDS&E: Collaborative Research: Machine Learning on Dynamical Systems via Topological Features
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批准号:1622320
-
项目类别:Standard Grant
-
资助金额:$10.17万
-
财政年份:2016
-
负责人:Elizabeth Munch
-
依托单位:
国内基金
海外基金
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