Sequence analysis of Rh polypeptide cDNAs and its application to forensic practice
Sequence analysis of Rh polypeptide cDNAs and its application to forensic practice
批准号:
05807039
负责人:
KAJII Eiji
金额:
$1.22万
依托单位:
依托单位国家:
日本
项目类别:
Grant-in-Aid for General Scientific Research (C)
财政年份:
1993
资助国家:
日本
项目状态:
已结题
起止时间:
1993 至 1994
中文摘要
从扩增产物中分离到两个Rh多肽基因,暂定名为RHPI和RhPII。两个克隆都有一个由1251个核苷酸组成的开放阅读框。与已发表的序列相比,RHPI克隆显示为单核苷酸替换,没有氨基酸替换。另一方面,RhPII基因克隆在开放阅读框上有41个核苷酸替换,导致31个氨基酸替换。通过对在网织红细胞中表达的Rh相关mRNA亚型的系统分析,分别鉴定了11个和5个截短的RHPI和RhPII cDNAs。这些异构体似乎是由6个RHPI和3个RhPII外显子的组合剪接而产生的。我们的结果表明,Rh相关多肽的异构体在C末端不同。因此,Rh相关基因的多个RNA剪接途径在两个Rh相关基因中操作,甚至在人类红系细胞的单个细胞谱系中也是如此。利用RT-PCR和Southern杂交分析纯化的人白细胞群体中Rh基因在mRNA上的表达。扩增产物在CD19、TCR-1、CD14、CD13、CD71、CD19、-TCR-1、CD19、CD14、CD19、TCR等细胞中扩增出单一条带,但在CD13、CD71、CD19、CD19、CD71、CD19、CD19、CD71、CD19、CD14、CD19等细胞中扩增出单一条带。另一方面,在所有这些细胞中,3‘区的PCR产物如预期的那样显示出多条额外的条带先于该条带迁移,这在每个细胞中表现出明显不同的条带集合。额外的条带似乎由RHPI-和RhPII-cDNA剪接异构体组成。这些结果表明,Rh基因的表达并不局限于人类红系。此外,不同的转录起始点可能优先用于Rh基因的表达。
英文摘要
Two Rh polypeptide cDNA have been isolated from the PCR products and tentatively designated RhPI cDNA and RhPII cDNA.Both cDNA clones have an open reading frame composed of 1251 nucleotides. The RhPI cDNA clone shows a single nucleotide substitution with no amino acid substitution compared with the published sequence. The RhPII cDNA clone, on the other hand, differs from the above by 41 nucleotide substitutions with the open reading frame, resulting in 31 amino acid substitutions.By a systemic analysis of Rh-related mRNA isoforms expressed in reticulocytes, eleven and five truncated isoforms of the RhPI and RhPII cDNAs, respectively, were identified. These isoforms appear to be generated by combinatorial splicing of six RhPI and three RhPII exons. Our results suggest that the Rh-related polypeptide isoforms differing at the C terminus. Multiple RNA splicing pathway are thus operative in the two Rh-related genes even within a single cell lineage of human erythroid cells.The expression of the Rh gene at the mRNA was analyzed in purified populations of human leukocytes by using RT-PCR followed by Southern blot analysis. The PCR products of the 5^1-terminal region showed a single band as expected in the CD19^+TCR-1^- and CD14^+ cells but doubtfully in the CD13^+CD71^- and CD19^-TCR-1^+ cells. On the other hand, in all these cells, the PCR products of the 3' region exhibited multiple additional bands migrating ahead of the band as expected, which showed distinctly different sets of bands in each cell. The additional bands appeared to consist of RhPI-and RhPII-cDNA splicing isoforms. These results indicated that the expression of the Rh gene is not restricted to human erythroid lineage. Additionally, it was suggested that different transcription initiation sites might be utilized preferentially for Rh gene expression.
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Eiji Kajii: "Intricate combinatorial patterns of exon splicing generate multiple Rh-related isoforms in human erythroid cells" Human Genetics. (in press).
Eiji Kajii:“外显子剪接的复杂组合模式在人类红系细胞中产生多种 Rh 相关亚型”《人类遗传学》。
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Fuminori Umenishi: "Molecular analysis of Rh polypeptides in a family with Rh-D positive and RhD-negative phenotypes." Biocemical Journal. (in press).
Fuminori Umenishi:“Rh-D 阳性和 RhD 阴性表型家族中 Rh 多肽的分子分析。”
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Umenishi Fuminori: "Indentification of two Rh mRNA isoforms expressed in immature erythroblasts" Biochemical and Biophysical Research Communications. 198. 1135-1142 (1994)
Umenishi Fuminori:“未成熟成红细胞中表达的两种 Rh mRNA 亚型的鉴定”生物化学和生物物理研究通讯。
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Eiji Kajii: "Expression of Rh blood group gene transcripts in human leukocytes" Biochemical and Biophysical Research Communications. 202. 1497-1504 (1994)
Eiji Kajii:“Rh 血型基因转录物在人类白细胞中的表达”生物化学和生物物理研究通讯。
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Iwamoto, S., Omi, T., Kajii, E.and Ikemoto, S.: "Genetic oraganization of the glycoprotein D gene : Duffy blood group Fy^a/Fy^b alloantigen system is associated with a polymorphism at the 44 amino acid residue." Blood. 85. 622-626 (1995)
Iwamoto, S.、Omi, T.、Kajii, E. 和 Ikemoto, S.:“糖蛋白 D 基因的遗传组织:达菲血型 Fy^a/Fy^b 同种抗原系统与 44 个氨基酸的多态性相关
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共 27 条
Efficiency of community medicine as seen from the regional medical demand and medical resources through the use of community helthcare data bank
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项目类别:Grant-in-Aid for Scientific Research (A)
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负责人:KAJII Eiji
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依托单位:
Further investigation on the Rh blood group system for the expression of the RH gene and the epitopes of the Rh antigens
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依托单位:
Molecular genetical analysis of the epitopes on Rh blood group antigen and establishment of genetic examination system in RH genes.
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依托单位:
The study on the nucleotide sequences of the RH genes and the Rh genotyping.
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依托单位:
Study on the relationship between erythroid differentiation and expression of blood group substances.
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负责人:KAJII Eiji
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依托单位:
海外基金