Horizontal gene transfers from eubacteria to lepidopeteran insects during evolution : Mechanism and and biological significance.
Horizontal gene transfers from eubacteria to lepidopeteran insects during evolution : Mechanism and and biological significance.
批准号:
14360032
负责人:
SHIMADA Toru
金额:
$9.66万
依托单位:
依托单位国家:
日本
项目类别:
Grant-in-Aid for Scientific Research (B)
财政年份:
2002
资助国家:
日本
项目状态:
已结题
起止时间:
2002 至 2003
中文摘要
在遥远的物种之间进行水平或横向的基因转移在细菌中很常见。然而,在真核生物中,除了少数例外,水平基因转移还没有报道:Mita等人。(2003)报道了在BYX EST数据库中发现的几个编码几丁质酶(Bmchi-h)、蔗糖酶(β-呋喃果糖苷酶)、甘油磷酸二酯酶(GlpQ)和葡萄糖-L-磷酸酶的基因,与细菌的同源性高于与真核生物的同源性。其中,Bmchi-h已被定位到家蚕染色体上(Daimon等人,2003年)。这些都是鳞翅目昆虫和细菌之间水平基因转移的候选对象。本研究进一步分析了BmCHI-h的酶学性质,在出生的BYX和其他鳞翅目昆虫基因组中不仅存在细菌来源的基因,还存在杆状病毒来源的基因。Friesen和Nissen(1990)报道了来自Ni毛霉的“TED”元件的存在,它包含三个开放阅读框架,两侧是ltrs。第三个ORF与第二类杆状病毒囊膜融合蛋白基因(如LdNPV中的ORF 130)同源。它的结构与包括吉普赛人在内的果蝇内源性逆转录病毒相似。我们发现,不仅毛霉菌,而且家蚕也携带逆转录病毒样分子。EST和全基因组鸟枪序列似乎包含至少5个逆转录病毒样元件,其最终的ORF编码ENV样蛋白。我们还发现了12个基因组DNA片段序列,与家蚕线粒体DNA具有很强的同源性。这是第一个证明家蚕基因组已经整合了线粒体DNA的证据。
英文摘要
Horizontal or lateral gene transfers between distantly separated species are common in bacteria. In eukaryotes, however, horizontal gene transfers have not been reported with a few exceptions : Mita et al. (2003) reported that several genes found in the Born byx EST database that encode a chitinase (BmChi-h), sucrase (beta-fructofuranosidase), glycerophosphoryl phosphodiesterase (GlpQ), and glucose-l-phosphatase, show higher homology to bacteria than to eukaryotes. Among these, BmChi-h has been mapped to the silkworm chromosome (Daimon et al., 2003). These are candidates for horizontal gene transfer between lepidopterans and bacteria. The enzymatic properties of BmChi-h were further analyzed in this study.Not only are there bacterium-derived genes, but also baculovirus-derived genes in the Born byx and other lepidopteran genomes. Friesen and Nissen (1990) reported the presence of the "TED" element from Trichoplusia ni, which contains three open reading frames flanked by LTRs. The third ORF is homologous to the gene for envelope fusion proteins (e. g., ORF 130 in LdNPV) in Class II baculoviruses. Its structure is similar to Drosophila endogenous retroviruses, including gypsy. We found that not only Trichoplusia but also Bombyx carries retrovirus-like elements. The EST and the whole-genome shotgun sequences seem to contain at least 5 families of retrovirus-like elements, whose final ORFs encode ENV-like proteins.We also found 12 fragmental sequences of genomic DNA that show strong homology to mitochondrial DNA of Bombyx mori. This is the first evidence indocating the Bombyx genome has incorporated mitochondrial DNA.
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Abe, H., Sugasaki, T., Terada, T., Kanehara, M., Ohbayashi, F., Shimada, T., Kawai, S., Mita, K, Oshiki, T: "Nested retrotransposons on the W chromosome of the wild silkworm Bornbyx mandarins"Insect Mol.Biol.. 11. 307-314 (2002)
Abe, H.、Sugasaki, T.、Terada, T.、Kanehara, M.、Ohbayashi, F.、Shimada, T.、Kawai, S.、Mita, K、Oshiki, T:“W 染色体上的嵌套逆转录转座子
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Kazuei Mita, Mitsuoki Morimyo, Kazuhiro Okano, Yoshiko Koike, Junko Nohata, Hideki Kawasaki, Keiko Kadono-Okuda, Kimiko Yamamoto, Masataka G.Suzuki, Toru Shimada, Marian R.Goldsmith, Susumu Maeda: "The construction of an EST database for Bombyx mori and i
Kazuei Mita、Mitsuoki Morimyo、Kazuhiro Okano、Yoshiko Koike、Junko Nohata、Hideki Kawasaki、Keiko Kadono-Okuda、Kimiko Yamamoto、Masataka G.Suzuki、Toru Shimada、Marian R.Goldsmith、Susumu Maeda:“构建 EST 数据库
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Katsuma, S., Tanaka, S., Shimada, T., Kobayashi, M.: "Reduced cysteine protease activity of the hemolymph of Bornbyx mori, larvae infected with fp25K-inactivated Bombyx mori nucleopolyhedrovirus, results in the reduced postmortem host degradation"Arch.Vir
Katsuma, S.、Tanaka, S.、Shimada, T.、Kobayashi, M.:“感染 fp25K 灭活的家蚕核多角体病毒的家蚕幼虫血淋巴的半胱氨酸蛋白酶活性降低,导致死后宿主降解减少”
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Daimon, T., Hamada, K., Mita, K., Okano, K., Suzuki, M.G., Kobayashi, M., Shimada, T.: "Bornbyx mori gene, BmChi-h, encodes a protein homologous to bacterial and baculovirus chitinases"Insect Biochem.Mol.Biol. 33. 749-759 (2003)
Daimon, T.、Hamada, K.、Mita, K.、Okano, K.、Suzuki, M.G.、Kobayashi, M.、Shimada, T.:“Bornbyx mori 基因 BmChi-h 编码与细菌同源的蛋白质,并且
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嶋田 透: "カイコのゲノムが解き明かす昆虫の謎.東京大学公開講座76「ゲノム 命の設計図」"東京大学綜合研究会編.東京大学出版会. 185-216 (2003)
岛田彻:“蚕基因组揭示的昆虫之谜。东京大学公开讲座76‘基因组:生命蓝图’”,东京大学研究小组编辑,东京大学出版社185-216(2003)。
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