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Genomewide linkage study and identification of susceptibility of ossification of the posterior longitudinal ligament of the spine

Genomewide linkage study and identification of susceptibility of ossification of the posterior longitudinal ligament of the spine
全基因组连锁研究及脊柱后纵韧带骨化易感性鉴定
批准号:
13470301
负责人:
INOUE Ituro
金额:
$10.56万
依托单位:
依托单位国家:
日本
项目类别:
Grant-in-Aid for Scientific Research (B)
财政年份:
2001
资助国家:
日本
项目状态:
已结题
起止时间:
2001 至 2002

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中文摘要
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英文摘要
Ossification of the posterior longitudinal ligament (OPLL) of the spine is a subset of "bone forming" diseases, characterized by ectopic ossification in the spinal ligaments. We performed a genomewide linkage study with 142 affected sib-pairs to identify genetic loci related to OPLL. In multipoint linkage analysis using GENEHUNTER-PLUS, evidence of linkage to OPLL was detected on chromosomes 1p, 6p, 11q, 14q, 16q, and 21q. The best evidence of linkage was detected near D21S1903 on chromosome 21q22.3 (maximum Z_<Ir> = 3.97), therefore the linkage region was extensively investigated for linkage disequilibrium analysis with single nucleotide polymorphisms (SNPs) covering 20 Mb. One hundred-fifty positional candidate genes lie in the region and 600 gene-based SNPs were genotyped. There were positive allelic associations with 7 genes (P < 0.01) in 280 patients and 210 controls and 4 of the 7 genes were clustered within a region of 750 kb, about 1.2 Mb telomeric from D21S1903. Extensive linkage disequilibrium and association studies of the 4 genes indicated that SNPs in the collagen 6A1 gene (COL6A1) were strongly associated with OPLL (P = 0.000003). Haplotype analysis with 3 SNPs in COL6A1 gave a single point P value of 0.0000007. Pinpointing the susceptibility to OPLL by genomewide linkage and linkage disequilibrium studies permits us to investigate the pathogenesis of OPLL, which might lead to the development of novel therapeutic tools.
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Havelka S: "Are diffuse idiopathic skeletal hyperostosis (DISH) and ossification of the posterior longitudinal ligament of the spine (OPLL) genetically related?"Annal. Rheum. Dis.. ARD. 118 (2001)
Havelka S:“弥漫性特发性骨骼骨质肥厚 (DISH) 和脊柱后纵韧带骨化 (OPLL) 是否有遗传相关性?”Annal。
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Shimo-onoda K, Tanaka T, Furushima K, Nakajima T, Toh S, Harata S, Yone K, Komiya S, Adachi H, Nakamura E, Fujimiya H, Inoue I: "Akaike's information criterion for an alternative measure of linkage disequilibrium"J Hum Genet. 47. 649-655 (2002)
Shimo-onoda K、Tanaka T、Furushima K、Nakajima T、Toh S、Harata S、Yone K、Komiya S、Adachi H、Nakamura E、Fujimiya H、Inoue I:“Akaike 连锁不平衡替代度量的信息标准”
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Maeda S, Ishidou Y, Koga H, Taketomi E, Ikari K, Komiya S, Takeda J, Sakou T, and Inoue I: "Functional impact of human collagen α 2 (X1) gene polymorphism in pathogenesis of ossification of the posterior longitudinal ligament of the spine"J. Bone. Miner.
Maeda S、Ishidou Y、Koga H、Taketomi E、Ikari K、Komiya S、Takeda J、Sakou T 和 Inoue I:“人胶原蛋白 α 2 (X1) 基因多态性在后纵韧带骨化发病机制中的功能影响脊柱”J. Bone. Miner.
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17
    Large scale GWAS and exome analyses of intracranial aneurysms
    • 批准号:
      22241049
    • 项目类别:
      Grant-in-Aid for Scientific Research (A)
    • 资助金额:
      $25.54万
    • 财政年份:
      2010
    • 负责人:
      INOUE Ituro
    • 依托单位:
    Ossification of the Pposterior Longitudinal Ligament
    Genetic analyses of intracranial aneurysms
    Gene expression profile during osteoblaslic differentiation of human mesenchymal cells
    • 批准号:
      13557124
    • 项目类别:
      Grant-in-Aid for Scientific Research (B)
    • 资助金额:
      $7.94万
    • 财政年份:
      2001
    • 负责人:
      INOUE Ituro
    • 依托单位:
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