Molecular mechanism of substrate recognition of the ubiquitin-ligases that recognize sugar chain
识别糖链的泛素连接酶底物识别的分子机制
基本信息
- 批准号:15580085
- 负责人:
- 金额:$ 2.37万
- 依托单位:
- 依托单位国家:日本
- 项目类别:Grant-in-Aid for Scientific Research (C)
- 财政年份:2003
- 资助国家:日本
- 起止时间:2003 至 2004
- 项目状态:已结题
- 来源:
- 关键词:
项目摘要
In an attempt to find novel biological functions for N-glycans, we screened mouse brain extracts for proteins bound to various sugar probes, and found Fbx2 an F-box protein, binds specifically to proteins attached with N-linked high-mannose type oligosaccharides, and subsequently contributes to ubiquitylation of N-glycosylated proteins. We propose that SCF^<Fbx2> ubiquitylaltes N-glycosylated proteins, which are translocated from the ER to the cytosol by the quality control mechanism. In this study, we found another F-box protein, Fbs6b that recognize N-glycans. Both Fbx2 and Fbx6b interacted with glycoproteins containing high-mannose oligosaccharides, whose protein modification occurs in the ER. X-ray crystallographic and nuclear magnetic resonance (NMR) studies of the substrates-binding domain of Fbx2 revealed that Fbx2 recognized the inner chitobiose of high-mannose oligosaccharides by a small hydrophobic pocket located at the top of the β-barrel. Both Fbx2 and Fbx6b proteins interacted with denatured glycoproteins, which were modified with not only high-mannose but also complex-type oligosaccharides, more efficiently than native proteins. Given that Fbs proteins interact with innermost chitobiose in N-glycans, we propose that Fbs proteins distinguish native from unfolded glycoproteins by sensing the exposed chitobiose structure.
为了寻找N-聚糖的新的生物学功能,我们筛选了小鼠脑提取物中与各种糖探针结合的蛋白质,发现Fbx 2是一种F盒蛋白,特异性地与N-连接的高甘露糖型寡糖连接的蛋白质结合,随后有助于N-糖基化蛋白的泛素化。我们认为SCF是<Fbx2>泛素化的N-糖基化蛋白,通过质量控制机制将其从内质网转移到胞质溶胶中。在这项研究中,我们发现了另一种识别N-聚糖的F-box蛋白Fbs 6 b。Fbx 2和Fbx 6 b都与含有高甘露糖寡糖的糖蛋白相互作用,其蛋白质修饰发生在ER中。对Fbx 2底物结合结构域的X射线晶体学和核磁共振(NMR)研究表明,Fbx 2通过位于β-桶顶部的小疏水口袋识别高甘露糖寡糖的内部壳二糖。Fbx 2和Fbx 6 b蛋白质与变性糖蛋白相互作用,变性糖蛋白不仅用高甘露糖修饰,而且用复合型寡糖修饰,比天然蛋白质更有效。鉴于Fbs蛋白与N-聚糖中最内层的壳二糖相互作用,我们建议Fbs蛋白通过感测暴露的壳二糖结构来区分天然的未折叠的糖蛋白。
项目成果
期刊论文数量(40)
专著数量(0)
科研奖励数量(0)
会议论文数量(0)
专利数量(0)
Y.Yoshida: "A novel role for N-glycans in the ERAD system."J.Biochem.. 134. 183-190 (2003)
Y.Yoshida:“N-聚糖在 ERAD 系统中的新作用。”J.Biochem.. 134. 183-190 (2003)
- DOI:
- 发表时间:
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- 影响因子:0
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- 通讯作者:
T.Mizushima, et al.: "Structural basis of sugar-recognizing ubiquitin ligase."Nature Struct.Mol.Biol. in press.
T.Mizushima 等人:“糖识别泛素连接酶的结构基础。”Nature Struct.Mol.Biol。
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- 影响因子:0
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YOSHIDA Yukiko其他文献
YOSHIDA Yukiko的其他文献
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{{ truncateString('YOSHIDA Yukiko', 18)}}的其他基金
Elucidation of the molecular mechanism how deficiency of deglycosylation in the cytosol causes abnormalities in organism.
阐明细胞质中去糖基化缺陷如何导致生物体异常的分子机制。
- 批准号:
19H02926 - 财政年份:2019
- 资助金额:
$ 2.37万 - 项目类别:
Grant-in-Aid for Scientific Research (B)
Analysis of the mechanism how glycosylation of proteins functions as a signal for ubiquitination
蛋白质糖基化作为泛素化信号的机制分析
- 批准号:
16K07705 - 财政年份:2016
- 资助金额:
$ 2.37万 - 项目类别:
Grant-in-Aid for Scientific Research (C)
Identification of target substrates of uncharacterized F-box proteins.
鉴定未表征的 F-box 蛋白的靶底物。
- 批准号:
24580152 - 财政年份:2012
- 资助金额:
$ 2.37万 - 项目类别:
Grant-in-Aid for Scientific Research (C)
Analysis of substrate-recognition mode by novel ubiquitin ligase related to endoplasmic reticulum-associated degradation pathway.
与内质网相关降解途径相关的新型泛素连接酶的底物识别模式分析。
- 批准号:
21580121 - 财政年份:2009
- 资助金额:
$ 2.37万 - 项目类别:
Grant-in-Aid for Scientific Research (C)
Screening for the targets of F-box proteins by using dominant-negative mutants
使用显性失活突变体筛选 F-box 蛋白的靶标
- 批准号:
19044049 - 财政年份:2007
- 资助金额:
$ 2.37万 - 项目类别:
Grant-in-Aid for Scientific Research on Priority Areas
Elucidation of novel roles of F-box protein that recognizes sugar chain.
阐明识别糖链的 F-box 蛋白的新作用。
- 批准号:
19580114 - 财政年份:2007
- 资助金额:
$ 2.37万 - 项目类别:
Grant-in-Aid for Scientific Research (C)
Experimental study on the effect of Pd-Co dental casting ferro-magnetic alloys in the bone tissue.
Pd-Co牙科铸造铁磁合金对骨组织影响的实验研究。
- 批准号:
63570939 - 财政年份:1988
- 资助金额:
$ 2.37万 - 项目类别:
Grant-in-Aid for General Scientific Research (C)
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