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Mechanism of biogenesis for built-in type quinone cofactor and application for composite-type catalytic antibody

Mechanism of biogenesis for built-in type quinone cofactor and application for composite-type catalytic antibody
内置型醌辅因子的生物发生机制及复合型催化抗体的应用
批准号:
14560066
负责人:
OKAJIMA Toshihide
金额:
$2.62万
依托单位:
依托单位国家:
日本
项目类别:
Grant-in-Aid for Scientific Research (C)
财政年份:
2002
资助国家:
日本
项目状态:
已结题
起止时间:
2002 至 2004

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中文摘要
翻译
为了阐明内置协因子的生物发生机制,以全球节杆菌(Arthrobacter Globbiformis,AGAO)含铜胺氧化酶为研究对象,用X-射线衍射法分析了自催化生成TOPQ的过程。然后,测定了三种中间体在TPQ生物发生过程中的X射线结构,清楚地显示了生物发生过程中前驱体Tyr与Cu2+<2+>离子及其构象电荷的相互作用。此外,还用丙氨酸残基取代了三个与铜离子配位的舌状His残基,以阐明它们在TPQ生物发生中的作用。对这些突变酶的X-射线晶体结构和动力学研究表明,准确的Cu2+和gt;离子位置对于高效的TPQ生物合成是非常重要的。为了在agao的活性部位产生人工醌辅助因子,通过定点突变获得了D298K突变体agao。当D298K与Cu2+>离子孵育被激活时,形成了一个独特的发色团,其λ_<*>为450 nm,与野生型Tpq的λ_<*>=480 nm不同。通过对BLO D298K晶体结构的改进,发现TPQ环上的C2原子与LYS298上的N_ε原子以亚氨基双键共价键合。虽然赖氨酸酪氨酸苯二酚的形成是预期的,但所鉴定的类苯醌结构是一种新的自催化产生的辅因子。此外,为了产生一种复合型新的苯二酚酶,还产生了Y382C突变体。通过将Y382C与硫代苯酚和Cu2+≫离子反应,尽管没有检测到UV/Vis光谱的变化,但对苯乙胺的催化活性很低,但却很明显。由于在没有Cu2+的情况下没有检测到催化活性,因此生物发生反应有可能形成任何辅因子,从而导致催化活性。
英文摘要
To elucidate the biogenesis mechanism of built-in cofactors, the self-catalytic generation process of topaquinone cofactor (TPQ) was analyzed by frame-trapped X-ray crystallography, using copper-containing amine oxidase from Arthrobacter globiformis (AGAO). Then, X-ray structures of three intermediates during the TPQ biogenesis were determined, clearly showing the interactions with Cu^<2+> ion of precursor Tyr and its conformational charges during the biogenesis. Three tongued His residues coordinating Cu^<2+> ion were also substituted with Ala residue to clarify their roles on the TPQ biogenesis. The X-ray crystallographic and kinetic studies for these mutant enzymes demonstrate that precise position of Cu^<2+> ion is significantly important for the efficient TPQ biogenesis.To generate artificial quinone cofactor in the active site of AGAO, D298K mutant AGAO was prepared by site-directed mutagenesis. When D298K was activated by incubation with Cu^<2+> ion, a unique chromophore with λ_<***> of 450 nm, which is distinct from that of TPQ(λ_<***>=480 nm) in the wild type, was formed. By careful refinements in the X-ray crystallography of bolo D298K, it was found that C2 atom of TPQ ring is covalently bound to N_ε atom of Lys298 through imino double bond. Although the formation of lysine tyrosyl quinone would be expected, the identified quinone-like structure is a novel cofactor generated autocatalytically. Further, to produce a composite-type new quinone enzyme, Y382C mutant was produced. By incubating Y382C with mercaptophenol and Cu^<2+> ion, despite of undetectable UV/vis spectral changes, the low but apparent catalytic activity using phenethylamine was detected. Because no catalytic activity was detected in the absent of Cu^<2+>, it is possible that the biogenesis reaction forms any cofactor, resulting in the catalytic activity.
期刊论文(52)
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DOI: 10.1038/nsb824
发表时间: 2002-08-01
期刊: NATURE STRUCTURAL BIOLOGY
影响因子: --
作者: [Kim, M, Okajima, T, Yamaguchi, H]
通讯作者: Yamaguchi, H
タンパク質科学(後藤祐児・桑島邦博・谷澤克行編)
蛋白质科学(后藤雄二、桑岛邦宏、谷泽克之编)
DOI: --
发表时间: 2005
期刊:
影响因子: --
作者: [岡島 俊英, 谷澤 克行]
通讯作者: 谷澤 克行
岡島俊英, 谷澤克行: "ペプチド・ビルトイン型キノン補酵素研究の新展開"蛋白質核酸酵素. 48. 740-746 (2003)
Toshihide Okajima、Katsuyuki Tanizawa:“肽和内置醌辅酶研究的新进展”蛋白质核酸酶 48. 740-746 (2003)。
DOI: --
发表时间:
期刊:
影响因子: --
作者: []
通讯作者:
DOI: 10.1143/jjap.41.3916
发表时间: 2002-06-01
期刊: JAPANESE JOURNAL OF APPLIED PHYSICS PART 1-REGULAR PAPERS BRIEF COMMUNICATIONS & REVIEW PAPERS
影响因子: --
作者: [Contera, SA, Okajima, T, Iwasaki, H]
通讯作者: Iwasaki, H
共 23 条
    Mechanism of FeS cluster-binding crosslink enzyme and production of novel cyclic peptide
    • 批准号:
      24658288
    • 项目类别:
      Grant-in-Aid for Challenging Exploratory Research
    • 资助金额:
      $2.58万
    • 财政年份:
      2012
    • 负责人:
      OKAJIMA Toshihide
    • 依托单位:
    Structural and kinetic studies for the refined reaction mechanism in built-in-cofactor dependent quinone enzymes mediating proton and electron transfers
    • 批准号:
      18350085
    • 项目类别:
      Grant-in-Aid for Scientific Research (B)
    • 资助金额:
      $10.37万
    • 财政年份:
      2006
    • 负责人:
      OKAJIMA Toshihide
    • 依托单位:
    海外基金