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Development of Crystallization Techniques for Membrane Proteins : on the Bese of Understanding of Protein-Structure Determining Forces

Development of Crystallization Techniques for Membrane Proteins : on the Bese of Understanding of Protein-Structure Determining Forces
膜蛋白结晶技术的发展:基于对蛋白质结构决定力的理解
批准号:
01304061
负责人:
KOUYAMA Tsutomu
金额:
$6.91万
依托单位国家:
日本
项目类别:
Grant-in-Aid for Co-operative Research (A)
财政年份:
1989
资助国家:
日本
项目状态:
已结题
起止时间:
1989 至 1990

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中文摘要
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英文摘要
Protein crystallization is a bottle-necked process in crystallographic analyses of the tertiary structure of proteins. Especially membrane proteins are very difficult to crystallize. In this research project, we challenged to crystallize many membrane proteins, aiming at establishing general rules for the three-dimensional crystallization of membrane proteins. The membrane proteins that we examined are : bacteriorhodopsin, rhodopsin (bovine and octopus), receptor proteins of neurotransmitters, cytochrome c oxidase (bovine heart), photosynthetic reaction center (a red alga), Ca++-binding membrane proteins, the Mling protein of flagellar motors (Salmonella), H+-ATPase (a thermophilic bacterium PS3). Actin and recA protein, which are known to self-assemble to form filamentary aggregates, were also investigated. Difficulty in making high-quality crystals of membrane proteins or hydrophobic pfoteins comes primarily from their instability in solubilized or monomeric states. Thus we tried to … More understand the physical forces stabilizing the tertiary structure of membrane proteins ; e. g., protein denaturation and protein-protein interaction were investigated in the presence of man of detergents and chemicals (e. g., alcohols).The project team consisted of young biophysicists who had been long working on membrane proteins. But only a few members had been familiar to the protein crystallography. In order to enlighten and encourage each other, therefore, we hold several public meetings and discussed the difficulties that were encountered in the trials of protein crystallization. We were surprised to find a large audience in the meetings, because we had thought that the protein crystallography was not very active in Japan. Now we understand that a large number of researchers are interested to protein crystallization. We are convinced that the protein crystallography in Japan will become very active in future.In the discussion about crystallization techniques, the followings were proposed to be prominent : 1) A high-quality crystal can be grown by decreasing or increasing temperature very slowly, when the protein solubility is significantly temperature-dependent ; 2) Two kinds of detergent can be used in combination, when one of them is too strong to keep the protein structure while the other is too mild to solubilize membranes ; 3) Vapor diffusion in the presence of a temperature gradient allows proteins to be concentrated locally and thus to be crystallized in a restricted region. Also, many other factors that influence protein crystallization, i. e., the gravity, the purity of protein, the self-oxidation of protein, were discussed. Video-recording of crystallization processes was proven to be powerful in understanding the mechanism of protein-protein association. Less
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池上 明: "学会出版センタ-" 生命科学の基礎6:生体膜の分子素子・分子機械, 341 (1990)
池上彰:《学会出版中心》生命科学基础6:生物膜中的分子元素和分子机器,341(1990)
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通讯作者:
Nasuda-Kouyama, A., Fukuda, K., and Kouyama.: "Effect of a light-induced pH gradient on purple-to-blue and purple-to-red transitions of bacteriorhodopsin." Biochemistry. 29,. 6778-6788 (1990)
Nasuda-Kouyama, A.、Fukuda, K. 和 Kouyama.:“光诱导 pH 梯度对细菌视紫红质从紫色到蓝色和紫色到红色转变的影响。”
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Tokunaga, F., Iwasa, T., Miyagisi, M., Kayabe, S.: "Cloning of cDNA and amino acid sequence of one of chicken cone visual pigments." Biophys. Res. Commun.173,. 1212-12117 (1990)
Tokunaga, F.、Iwasa, T.、Miyagisi, M.、Kayabe, S.:“鸡锥视色素之一的 cDNA 和氨基酸序列的克隆。”
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Tomioka, A., Ribi, H. O., Tokunaga, M., Frruno, T., Sasabe, H., Miyano, K., and Wakabayashi, T.: "Structural abnalysis of muscle thin filament." Advances in Biophys.
Tomioka, A.、Ribi, H. O.、Tokunaga, M.、Frruno, T.、Sasabe, H.、Miyano, K. 和 Wakabayashi, T.:“肌肉细丝的结构分析”。
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38
    Structural and functional divergence of rhodopsin super-family
    • 批准号:
      21370070
    • 项目类别:
      Grant-in-Aid for Scientific Research (B)
    • 资助金额:
      $12.23万
    • 财政年份:
      2009
    • 负责人:
      KOUYAMA Tsutomu
    • 依托单位:
    Four Dimensional Structural Analysis of Biological Ion Pumps
    • 批准号:
      17370056
    • 项目类别:
      Grant-in-Aid for Scientific Research (B)
    • 资助金额:
      $6.85万
    • 财政年份:
      2005
    • 负责人:
      KOUYAMA Tsutomu
    • 依托单位:
    X-ray Crystallographic Analyses of Retinal Proteins
    • 批准号:
      15370066
    • 项目类别:
      Grant-in-Aid for Scientific Research (B)
    • 资助金额:
      $5.76万
    • 财政年份:
      2003
    • 负责人:
      KOUYAMA Tsutomu
    • 依托单位:
    Time-Resolved Crystallographic Studies of of Photoreceptor Membrane Proteins
    • 批准号:
      10680630
    • 项目类别:
      Grant-in-Aid for Scientific Research (C)
    • 资助金额:
      $2.3万
    • 财政年份:
      1998
    • 负责人:
      KOUYAMA Tsutomu
    • 依托单位:
    海外基金