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Structural and functional studies on biological macromolecules involved in the flow of genetic information and the cellular signal transduction.

Structural and functional studies on biological macromolecules involved in the flow of genetic information and the cellular signal transduction.
参与遗传信息流动和细胞信号转导的生物大分子的结构和功能研究。
批准号:
15107002
负责人:
YOKOYAMA Shigeyuki
金额:
$71.3万
依托单位:
依托单位国家:
日本
项目类别:
Grant-in-Aid for Scientific Research (S)
财政年份:
2003
资助国家:
日本
项目状态:
已结题
起止时间:
2003 至 2007

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中文摘要
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英文摘要
To understand in detail the systems of genetic expression and cellular signal transduction, which consist of cascades of macromolecular interactions, molecular interactions involved in the cascades were analyzed at atomic resolutions by crystallography. We targeted post-transcriptional tRNA processing and modification enzymes and aminoacyl-tRNA synthetases, which are responsible for accurate joining tRNA and amino acid during translation, and performed structural analyses of their complexes with tRNAs, other substrates, and/or inhibitors. We also determined the crystal structure of Vasa, an RNA helicase involved in the differentiation of Drosophila germline, and elucidated structural basis of the RNA double strand resolution by a DEAD-box RNA helicase. Furthermore, we succeeded in crystal structure determination of RNA polymerase and Dmc1, which play central roles in transcription and homologous recombination in meiosis, respectively. The structural information was applied to develop the artificial genetic code system to incorporate a useful, natural or non-natural amino acid into a specific position of any protein. We have established systems to incorporate tyrosine or lysine derivatives, and thus opened a way to the technology that facilitates incorporating an amino acid possessing fluorescent, reactive, or heavy-atom containing groups.
期刊论文(184)
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DOI: 10.1074/jbc.m310388200
发表时间: 2003-12-19
期刊: JOURNAL OF BIOLOGICAL CHEMISTRY
影响因子: 4.8
作者: [Tawaramoto, MS, Park, SY, Yokoyama, S]
通讯作者: Yokoyama, S
DOI: 10.1107/s1744309106036700
发表时间: 2006-10
期刊: Acta crystallographica. Section F, Structural biology and crystallization communications
影响因子: --
作者: [T. Yanagisawa;R. Ishii;R. Fukunaga;O. Nureki;S. Yokoyama]
通讯作者: T. Yanagisawa;R. Ishii;R. Fukunaga;O. Nureki;S. Yokoyama
DOI: 10.1038/nsmb722
发表时间: 2004-02-01
期刊: NATURE STRUCTURAL & MOLECULAR BIOLOGY
影响因子: 16.8
作者: [Kise, Y, Lee, SW, Nureki, O]
通讯作者: Nureki, O
An unnatural hydrophobic base pair system : site-specific incopration of nucleotide analogs into DNA and RNA
非天然疏水碱基对系统:核苷酸类似物位点特异性掺入 DNA 和 RNA
DOI: --
发表时间: 2006
期刊: Nat Methods 3(9)
影响因子: --
作者: [Hirao, I., Kimoto, M., Mitsui, T., Fujiwara, T., Kawai, R., Sato, A., Harada, Y., Yokoyama, S.]
通讯作者: S.
124
    Crystallographic studies of macromolecular complexes in transcription and translation : RNA polymerases and the ribosome
    Structure of RNA and RNP
    • 批准号:
      14035205
    • 项目类别:
      Grant-in-Aid for Scientific Research on Priority Areas
    • 资助金额:
      $47.17万
    • 财政年份:
      2002
    • 负责人:
      YOKOYAMA Shigeyuki
    • 依托单位:
    New stable-isotope labeling methods for structural studies
    • 批准号:
      08558076
    • 项目类别:
      Grant-in-Aid for Scientific Research (A)
    • 资助金额:
      $12.61万
    • 财政年份:
      1996
    • 负责人:
      YOKOYAMA Shigeyuki
    • 依托单位:
    Structural study on the mechanism of the signal transduction mediated by the Ras protein
    • 批准号:
      06404080
    • 项目类别:
      Grant-in-Aid for Scientific Research (A)
    • 资助金额:
      $19.84万
    • 财政年份:
      1994
    • 负责人:
      YOKOYAMA Shigeyuki
    • 依托单位:
    海外基金