Molecular Mechanisms of Complex Mixture Toxicity
Molecular Mechanisms of Complex Mixture Toxicity
批准号:
10172903
负责人:
Alvaro Puga
金额:
$44.83万
依托单位:
依托单位国家:
美国
项目类别:
财政年份:
2001
资助国家:
美国
项目状态:
已结题
起止时间:
2001-01-16 至 2023-06-30
关键词:
3-DimensionalAcetylationAcuteAffectApoptosisApplications GrantsArchitectureAromatic HydrocarbonsAryl Hydrocarbon ReceptorBenzo(a)pyreneBinding SitesBiologicalBiological AssayBrothersCCCTC-binding factorChemicalsChromatinChromatin Interaction Analysis by Paired-End Tag SequencingChromatin LoopChromiumChromosomesComplexComplex MixturesDNA DamageDiseaseDoseEnhancersEnvironmental ExposureEpidemiologyEpigenetic ProcessExposure toFAIRE sequencingGastrointestinal tract structureGene ExpressionGenesGenetic TranscriptionGenomeGenomic InstabilityGoalsGrantHDAC1 geneHazardous SubstancesHealthHepatocyteHistone H3Histone H4IncidenceIndividualIntestinesKnowledgeLeadLinkLiverLungMediatingMedicalMetalsMethylationMitogen-Activated Protein KinasesModificationMolecularMolecular TargetMusNucleosomesOccupational ExposureOralPatternPhenotypePhorbol EstersPhosphorylationPlayPoisonPositioning AttributePost-Translational Protein ProcessingPreventive measureProteinsRNA Polymerase IIResearchResearch SupportRoleSignal TransductionSignal Transduction PathwaySiteSpecificityStomachTechniquesTestingTissuesToxic effectTransactivationTranscription Factor AP-1Transcriptional RegulationTranslationsTransposaseVertebratesWorkplaceXCL1 geneanalogbasecarcinogenicitychromium hexavalent ionchromosome conformation capturecigarette smokecigarette smokingcohesincrosslinkdrinking watergenome-widegenome-wide analysisgenotoxicityhistone modificationimprintin vivoinducible gene expressionmammalian genomenovelpromoterrecruitresponsesmoking exposuretherapeutic developmentthree dimensional structuretoxicanttumor
中文摘要
项目总结
环境中暴露于有毒化合物的情况很少是由单一毒物的作用引起的。通常,
毒剂是一种复杂的化学物质混合物,数量从几个不等,如在职业中
暴露到几千次,如香烟烟雾。这项研究支持的长期目标是
GRANT是为了加深对接触有害健康影响的机制的理解
到铬(VI)和苯并[a]芘(BaP)的混合物,重点研究导致基因表达的机制
放松管制。我们已经证明,大剂量急性铬治疗激活了MAP激酶,干扰了
转录复合体的组装,HDAC1DNMT1与启动子染色质的交联物和∙
抑制Cr/BaP诱导基因的表观磷酸化、乙酰化和甲基化标记
组蛋白H3和H4的反式激活。这些变化抑制了RNA聚合酶II的靶向募集。
启动子,并阻断可诱导的基因表达,增加基因组的不稳定性,DNA损伤和细胞凋亡
同时降低克隆形成能力。我们使用了三种不同的分析方法,即FIRE
(甲醛辅助分离调节元件)、DANPOS(核小体动态分析)
通过测序的定位和占有率)和ATAC(转座酶可及染色质的分析)来测试
铬是否会引起染色质组织和结构的表观遗传变化
解释这种表型效应的多样性。具有高度统计学意义,所有三个测试都显示
铬导致CTCF(CCCTC结合因子)结合部位周围的染色质结构域及其
模拟,Boris(印迹位置调节器的兄弟),从关闭状态切换到开放染色质
或者正好相反。CTCF/Boris结合位点是染色体边界隔离的唯一决定因素
哺乳动物基因组,在转录调控中起着关键作用。此外,CTCF还具有独特的
负责建立染色质拓扑域,维护细胞的三维结构
基因组。我们的新发现引导我们假设,铬(VI)打破了CTCF连接所产生的连接
基因组结构和功能。具体地说,我们认为,铬(VI)破坏了三维染色质
染色体中拓扑相关结构域之间的组织和边界形成,破坏
转录调控序列之间的相互作用。基于这些发现,我们建议对此进行测试
通过确定铬(VI)处理是否扰乱了远程全基因组染色体内染色体的假说
以及由CTCF建立的染色体间相互作用以及它是否干扰了
并扰乱CTCF结合区的转录调控。这些知识来源于
这里提出的研究将对流行病学的生物学和医学翻译产生重大影响
铬暴露的发现,并通过识别有助于减少疾病发病率的分子靶点,将
为制定治疗和预防措施作出重大贡献。
英文摘要
PROJECT SUMMARY
Environmental exposures to toxic compounds rarely result from the action of single toxicants. Often, the
toxic agent is a complex mixture of chemical entities in numbers ranging from a few, such as in occupational
exposures, to several thousand, as in cigarette smoke. The long-range goal of the research supported by this
grant is to develop an understanding of the mechanisms responsible for the adverse health effects of exposure
to mixtures of chromium (VI) and benzo[a]pyrene (BaP), focusing on the mechanisms causing gene expression
deregulation. We have shown that high-dose acute chromium treatment activates MAP kinases, interferes with
the assembly of transcriptional complexes, cross-links HDAC1∙DNMT1 complexes to promoter chromatin and
inhibits epigenetic phosphorylation, acetylation and methylation marks established by Cr/BaP-induced gene
transactivation in histones H3 and H4. These changes inhibit recruitment of RNA polymerase II to target
promoters, and block inducible gene expression, increasing genomic instability, DNA damage and apoptosis
while decreasing clonogenic ability. We used three different analytical approaches, namely FAIRE
(Formaldehyde-Assisted Isolation of Regulatory Elements), DANPOS (Dynamic Analysis of Nucleosome
Positioning and Occupancy by Sequencing), and ATAC (Assay for Transposase-Accessible Chromatin), to test
whether chromium could cause epigenetic changes in chromatin organization and architecture that could
explain this diversity of phenotypic effects. With high statistical significance, all three tests showed that
chromium causes chromatin domains surrounding the binding sites for CTCF (CCCTC binding factor) and its
analog, BORIS (Brother of the Regulator of Imprinted Sites) to switch from states of closed to open chromatin
or the reverse. CTCF/BORIS binding sites are the sole determinants of chromosome boundary-insulation in the
mammalian genome, playing a critical role in transcriptional regulation. In addition, CTCF is also uniquely
responsible for establishing chromatin topological domains and maintaining the 3-dimensional structure of the
genome. Our novel findings lead us to the hypothesis that Cr(VI) breaks the links created by CTCF connecting
genome architecture and function. Specifically, we propose that Cr(VI) disrupts 3-dimensional chromatin
organization and boundary formation between topologically associated domains in chromosomes, destroying
the interactions between transcription regulatory sequences. Based on these findings, we propose to test this
hypothesis by determining whether Cr(VI) treatment disrupts the long-range genome-wide intrachromosomal
and interchromosomal interactions established by CTCF and whether it interferes with the insulator function of
CTCF and disrupts transcriptional regulation in CTCF-bound domains. The knowledge derived from the
research proposed here will have a major impact on the biological and medical translation of epidemiological
findings of chromium exposure and, by identifying molecular targets useful to reduce disease incidence, will
significantly contribute to the development of therapeutic and preventative measures.
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DOI:
10.1371/journal.pone.0142440
发表时间:
2015
期刊:
PloS one
影响因子:
3.7
作者:
[Carreira VS, Fan Y, Kurita H, Wang Q, Ko CI, Naticchioni M, Jiang M, Koch S, Zhang X, Biesiada J, Medvedovic M, Xia Y, Rubinstein J, Puga A]
通讯作者:
Puga A
DOI:
10.1007/s10565-022-09755-9
发表时间:
2023-08
期刊:
Cell biology and toxicology
影响因子:
6.1
作者:
[]
通讯作者:
Induction of oxidative stress responses by dioxin and other ligands of the aryl hydrocarbon receptor.
二恶英和芳烃受体的其他配体诱导氧化应激反应。
DOI:
10.2203/dose-response.003.03.003
发表时间:
2006
期刊:
Dose-response : a publication of International Hormesis Society
影响因子:
--
作者:
[Reichard,JohnF, Dalton,TimothyP, Shertzer,HowardG, Puga,Alvaro]
通讯作者:
Puga,Alvaro
DOI:
10.1385/ct:4:1:47
发表时间:
2004-01-01
期刊:
Cardiovascular toxicology
影响因子:
3.2
作者:
[Karyala, Saikumar, Guo, Junhai, Tomlinson, Craig R]
通讯作者:
Tomlinson, Craig R
DOI:
10.1385/ct:4:4:385
发表时间:
2004-01-01
期刊:
Cardiovascular toxicology
影响因子:
3.2
作者:
[Puga, Alvaro, Sartor, Maureen A, Medvedovic, Mario]
通讯作者:
Medvedovic, Mario
共 24 条
Gene-Environment Interactions in the Fetal Origin of Adult Cardiac Disease
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批准号:8966688
-
项目类别:
-
资助金额:$47.91万
-
财政年份:2014
-
负责人:Alvaro Puga
-
依托单位:
Transgenerational Inheritance of Epigenetic Effects of Polychlorinated Biphenyls
-
批准号:8599612
-
项目类别:
-
资助金额:$32.7万
-
财政年份:2013
-
负责人:Alvaro Puga
-
依托单位:
Gene-Environment Interactinos Training Program
-
批准号:8889398
-
项目类别:
-
资助金额:$25.64万
-
财政年份:2008
-
负责人:Alvaro Puga
-
依托单位:
Gene-Environment Interactinos Training Program
-
批准号:8296318
-
项目类别:
-
资助金额:$31.8万
-
财政年份:2008
-
负责人:Alvaro Puga
-
依托单位:
Core--DNA Microarray Facility
-
批准号:6618910
-
项目类别:
-
资助金额:$19.7万
-
财政年份:2002
-
负责人:Alvaro Puga
-
依托单位:
Core--DNA Microarray Facility
-
批准号:6579911
-
项目类别:
-
资助金额:$19.7万
-
财政年份:2002
-
负责人:Alvaro Puga
-
依托单位:
Core--DNA Microarray Facility
-
批准号:6617329
-
项目类别:
-
资助金额:$19.7万
-
财政年份:2002
-
负责人:Alvaro Puga
-
依托单位:
Molecular mechanisms of complex mixture toxicity
-
批准号:6578778
-
项目类别:
-
资助金额:$17.11万
-
财政年份:2002
-
负责人:Alvaro Puga
-
依托单位:
MOLECULAR MECHANISMS OF COMPLEX MIXTURE TOXICITY
-
批准号:6489868
-
项目类别:
-
资助金额:$30.6万
-
财政年份:2001
-
负责人:Alvaro Puga
-
依托单位:
CORE--SIGNAL TRANSDUCTION RESEARCH FACILITY
-
批准号:6495683
-
项目类别:
-
资助金额:$7.35万
-
财政年份:2001
-
负责人:Alvaro Puga
-
依托单位:
Molecular Mechanisms of Complex Mixture Toxicity
-
批准号:7164432
-
项目类别:
-
资助金额:$34.02万
-
财政年份:2001
-
负责人:Alvaro Puga
-
依托单位:
Molecular Mechanisms of Complex Mixture Toxicity
-
批准号:7563262
-
项目类别:
-
资助金额:$34.0万
-
财政年份:2001
-
负责人:Alvaro Puga
-
依托单位:
Molecular Mechanisms of Complex Mixture Toxicity
-
批准号:7337063
-
项目类别:
-
资助金额:$33.67万
-
财政年份:2001
-
负责人:Alvaro Puga
-
依托单位:
Molecular Mechanisms of Complex Mixture Toxicity
-
批准号:8402626
-
项目类别:
-
资助金额:$44.3万
-
财政年份:2001
-
负责人:Alvaro Puga
-
依托单位:
MOLECULAR MECHANISMS OF COMPLEX MIXTURE TOXICITY
-
批准号:6839479
-
项目类别:
-
资助金额:$30.6万
-
财政年份:2001
-
负责人:Alvaro Puga
-
依托单位:
Molecular Mechanisms of Complex Mixture Toxicity
-
批准号:8599770
-
项目类别:
-
资助金额:$44.75万
-
财政年份:2001
-
负责人:Alvaro Puga
-
依托单位:
MOLECULAR MECHANISMS OF COMPLEX MIXTURE TOXICITY
-
批准号:6223387
-
项目类别:
-
资助金额:$30.6万
-
财政年份:2001
-
负责人:Alvaro Puga
-
依托单位:
Molecular Mechanisms of Complex Mixture Toxicity
-
批准号:8040567
-
项目类别:
-
资助金额:$45.2万
-
财政年份:2001
-
负责人:Alvaro Puga
-
依托单位:
Molecular Mechanisms of Complex Mixture Toxicity
-
批准号:8210893
-
项目类别:
-
资助金额:$45.2万
-
财政年份:2001
-
负责人:Alvaro Puga
-
依托单位:
MOLECULAR MECHANISMS OF COMPLEX MIXTURE TOXICITY
-
批准号:6627073
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项目类别:
-
资助金额:$30.6万
-
财政年份:2001
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负责人:Alvaro Puga
-
依托单位:
海外基金