COVID and Translational Science supercomputer (CATS)
COVID and Translational Science supercomputer (CATS)
批准号:
10177277
负责人:
Patricia Kovatch
金额:
$200.0万
依托单位国家:
美国
项目类别:
财政年份:
2021
资助国家:
美国
项目状态:
已结题
起止时间:
2021-06-01 至 2022-05-31
关键词:
AreaAsthmaCOVID-19 pandemicCOVID-19 preventionComplexComputerized Medical RecordDataDengue FeverDiagnosisDiseaseDown SyndromeImageLong COVIDMalignant neoplasm of brainMemoryMental disordersMolecularMyocarditisPerformanceResearchResearch Project GrantsTimeTranslational ResearchTranslationsbody systemcoronavirus diseasedrug discoveryimprovedinstrumentpandemic diseasepetabyteshared memorysimulationsupercomputertranslational pipeline
中文摘要
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英文摘要
Abstract:
To enable new kinds of scientific discovery and translation related to the newly emerged COVID-19
pandemic, we are requesting a new high-performance instrument with large shared memory nodes. The
COVID and Translational Science (CATS) supercomputer, will support over $120 million in 50 research
projects for 46 PIs. Due to the urgent need for improved understanding, diagnosis, treatment and
prevention of COVID-19, related projects are very time-sensitive in the near-term. CATS will also be utilized
for a spectrum of translational science applications from molecular dynamic simulations leading towards
drug discovery and multi-scale analyses incorporating omic, electronic medical record data and images.
Even after the pandemic is better controlled, research will continue for years on the post-COVID-19
syndrome due to its complex invasion on multiple organ systems. Other disease areas needing CATS include
psychiatric disease, asthma, Down syndrome, myocarditis, Dengue fever and brain cancer. In total, CATS
will contain with 2,640 Intel cores, 82 TB of memory and 16 petabytes of storage. The enhanced capabilities
of CATS will shorten the time to solution and enable more complex biomedical analyses.
期刊论文(20)
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DOI:
10.1016/j.jacc.2021.12.023
发表时间:
2022-03-08
期刊:
Journal of the American College of Cardiology
影响因子:
24
作者:
[Farkouh ME, Stone GW, Lala A, Bagiella E, Moreno PR, Nadkarni GN, Ben-Yehuda O, Granada JF, Dressler O, Tinuoye EO, Granada C, Bustamante J, Peyra C, Godoy LC, Palacios IF, Fuster V]
通讯作者:
Fuster V
DOI:
10.1016/j.isci.2022.104192
发表时间:
2022-05-20
期刊:
ISCIENCE
影响因子:
5.8
作者:
[Wang, Chang, Lashua, Lauren P., Carter, Chalise E., Johnson, Scott K., Wang, Minghui, Ross, Ted M., Ghedin, Elodie, Zhang, Bin, Forst, Christian V.]
通讯作者:
Forst, Christian V.
DOI:
10.1038/s41467-023-38867-x
发表时间:
2023-06-03
期刊:
NATURE COMMUNICATIONS
影响因子:
16.6
作者:
[Gonzalez-Reiche, Ana, Alshammary, Hala, Schaefer, Sarah, Patel, Gopi F., Polanco, Jose C., Carreno, Juan Manuel, Amoako, Angela, Rooker, Aria, Cognigni, Christian, Floda, Daniel, van de Guchte, Adriana, Khalil, Zain, Farrugia, Keith, Assad, Nima, Zhang, Jian, Alburquerque, Bremy A., Sominsky, Levy, Gleason, Charles, Srivastava, Komal, Sebra, Robert, Ramirez, Juan David, Banu, Radhika, Shrestha, Paras, Krammer, Florian, Paniz-Mondolfi, Alberto, Sordillo, Emilia Mia, Simon, Viviana, van Bakel, Harm]
通讯作者:
van Bakel, Harm
DOI:
10.1186/s12879-022-07371-w
发表时间:
2022-04-24
期刊:
BMC INFECTIOUS DISEASES
影响因子:
3.7
作者:
[Schwarz, Erika Reategui, van de Guchte, Adriana, Dupper, Amy C., Caban, Ana Berbel, Nadkarni, Devika, Fox, Lindsey, Mills, Alexandra, Obla, Ajay, Chacko, Kieran, I, Oussenko, Irina, Samaroo, Flora, Polanco, Jose, Silvera, Richard, Smith, Melissa L., Patel, Gopi, Gitman, Melissa, Alburquerque, Bremy, Chung, Marilyn, Sullivan, Mitchell J., van Bakel, Harm, Altman, Deena R.]
通讯作者:
Altman, Deena R.
DOI:
10.1002/cpz1.405
发表时间:
2022-04
期刊:
Current protocols
影响因子:
--
作者:
[Del Rossi, Natalie, Chen, Jiaji G, Yuan, Guo-Cheng, Dries, Ruben]
通讯作者:
Dries, Ruben
共 15 条
Data Repository and Management Core
-
批准号:10424417
-
项目类别:
-
资助金额:$79.5万
-
财政年份:2015
-
负责人:Patricia Kovatch
-
依托单位:
Data Repository and Management Core
-
批准号:10684793
-
项目类别:
-
资助金额:$91.47万
-
财政年份:2015
-
负责人:Patricia Kovatch
-
依托单位:
Transforming Genomics with 5 PB Big Omics Data Engine Cray CS300-AC Supercomputer
-
批准号:8734830
-
项目类别:
-
资助金额:$194.7万
-
财政年份:2014
-
负责人:Patricia Kovatch
-
依托单位:
Data Repository and Management Core
-
批准号:10006827
-
项目类别:
-
资助金额:$108.66万
-
财政年份:--
-
负责人:Patricia Kovatch
-
依托单位:
Data Repository and Management Core
-
批准号:9814207
-
项目类别:
-
资助金额:$77.06万
-
财政年份:--
-
负责人:Patricia Kovatch
-
依托单位:
海外基金