Ion-Ion Interactions and the Reverse Hofmeister Effect
Ion-Ion Interactions and the Reverse Hofmeister Effect
批准号:
10202645
负责人:
BRUCE C GIBB
金额:
$37.24万
依托单位国家:
美国
项目类别:
财政年份:
2018
资助国家:
美国
项目状态:
已结题
起止时间:
2018-08-01 至 2023-06-30
关键词:
AddressAffectAffinityAmmoniumAmyloidAnionsBindingBinding SitesBiologicalCalorimetryCationsChargeChloridesComplexComputer AssistedCrystallizationDepositionDifferential Scanning CalorimetryDiseaseDrug IndustryEquilibriumEventFresh WaterGleanGoalsHealthHumanIonsKnowledgeLawsLeadLifeLigandsLinkMapsModelingMolecularNatureOrganic ChemistryPathway interactionsPerchloratesPersonal SatisfactionPharmacologic SubstancePlant RootsPlayPrecipitationPrion DiseasesPropertyProteinsResearchRoentgen RaysRoleSaltsScienceScientistSodium ChlorideSolubilitySolventsSpectrum AnalysisStructureSurface TensionThermodynamicsThrombosisTitrationsWaterWorkX-Ray Crystallographybiological systemsdesigndrug discoveryexperimental studyimprovedin silicolight scatteringmodels and simulationmolecular dynamicsphysical modelprotein aggregationprotein foldingresponsescreeningsimulationsmall moleculesolute
中文摘要
项目摘要
尽管对溶解的有机溶质和盐类的性质的研究已有130多年的历史,但我们
对支配它们如何相互作用的法律知之甚少。例如,考虑NAI可以导致
蛋白质的溶解度增加(霍夫迈斯特效应)或导致溶解度降低,并导致
蛋白质的沉淀(反向霍夫迈斯特效应,RHE)。这个应用程序与后者有关。
我们对RHE背后的分子相互作用的理解是有限的。事实上,这只是最后一次
十年来,人们已经证实,关键的非共价相互作用是那些在阴离子之间的作用
溶质上的盐基和带正电的基团。除此之外,细节很少:我们对
这种相互作用的大小以及它们是由库仑相互作用还是弥散相互作用主导的;我们
对可能主导溶质沉淀的特定离子对的存在知之甚少;我们
对凝聚和沉淀途径的机制知之甚少(S)。要开发一个
我们概述了对这些的理解:1)用设计用于从结构上探测离子-离子配对的模型宿主的研究
和热力学,从而揭示了这些如何导致聚集和沉淀的细节;2)
分子动力学(MD)模拟旨在揭示这些离子对的原子细节,以及水的作用
在调节它们相互作用的热力学方面起到了作用,以及;3)对蛋白质的研究,基于我们的
对模型主持人和MD模拟的理解,将开始系统地鉴定和量化
RHE明显存在于蛋白质中,以及这种现象背后的特殊离子-离子相互作用。
这些研究将解决以下科学问题:
·与RHE相关的具体离子-离子相互作用是什么?
·这些离子-离子相互作用的具体结构特征和热力学是什么?
·离子配对的性质和聚集之间是否有定性和定量的联系
小分子的沉淀?
·阴离子-蛋白质相互作用是否影响蛋白质的结构、稳定性和聚集性,
可以确定的方式?
·蛋白质中的RHE能否用作表征/识别蛋白质的标志?
·蛋白质中的RHE是否可以归因于特定的阴离子-蛋白质相互作用?
回答这些问题将提高我们对常见小分子的溶解度的理解。
到制药业,并导致对经常令人困惑和矛盾的RHE在
蛋白质。后一点不仅是确定纯化和结晶蛋白质的新方法的关键,而且也是
对了解蛋白在普恩病毒疾病和血栓形成中的不可逆沉积至关重要。
英文摘要
Project Summary
Although the properties of dissolved organic solutes and salts have been studied for over 130 years, we
know little of the laws governing how they interact. Consider for example the fact that NaI can lead to an
increase in the solubility of a protein (the Hofmeister Effect) or bring about a decrease in solubility and lead to
precipitation of a protein (the Reverse Hofmeister Effect, RHE). This application concerns the latter.
Our understanding of the molecular interactions behind the RHE is limited. Indeed, it is only in the last
decade that it has been confirmed that the key non-covalent interactions are those between the anion of the
salt and positively charged groups on the solute. Beyond this, details are sparse: We know little about the
magnitude of such interactions and whether they are dominated by Coulombic or dispersion interactions; we
know little about the existence of specific ion-pairs that might dominate the precipitation of a solute; and we
know little about the mechanisms of the aggregation and precipitation pathway(s). To develop an
understanding of these we outline: 1) studies with model hosts designed to probe ion-ion pairing structurally
and thermodynamically, and hence reveal details of how these lead to aggregation and precipitation; 2)
molecular dynamics (MD) simulations designed to reveal atomistic details of these ion pairs, and the role water
plays in modulating their thermodynamics of interaction, and; 3) studies with proteins that, building on our
understanding of model hosts and MD simulations, will begin to systematically qualify and quantify how the
RHE is manifest in proteins, and the specific ion-ion interactions behind this phenomenon.
These studies will address the following scientific questions:
· What are the specific ion-ion interactions pertinent to the RHE?
· What are the specific structural features and thermodynamics of these ion-ion interactions?
· Are there qualitative and quantitative links between the nature of ion pairing and the aggregation and
precipitation of small molecules?
· Do anion-protein interactions influence the structure, stability, and aggregation of proteins in specific,
determinable ways?
· Can the RHE in proteins be used as a signature to characterize/identify proteins?
· Can the RHE in proteins be attributed to specific anion-protein interactions?
Answering these questions will improve our understanding of the solubility of small molecules common
to the pharmaceutical industry, and lead to a clearer picture of the often bewildering and contradictory RHE in
proteins. This latter point is not only key to determining new ways to purify and crystallize proteins, but is also
crucial to understanding the irreversible deposition of proteins in prion diseases and thrombosis.
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DOI:
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发表时间:
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期刊:
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影响因子:
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DOI:
10.1080/10610278.2019.1629438
发表时间:
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期刊:
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影响因子:
3.3
作者:
[Wishard,Anthony, Gibb,BruceC]
通讯作者:
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阴离子与泛素结合及其与Hofmeister效应的相关性。
DOI:
10.1039/d0sc04245e
发表时间:
2020-11-04
期刊:
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影响因子:
8.4
作者:
[Yao W, Wang K, Wu A, Reed WF, Gibb BC]
通讯作者:
Gibb BC
DOI:
10.1021/jacs.9b03250
发表时间:
2019-08-14
期刊:
Journal of the American Chemical Society
影响因子:
15
作者:
[Pathak P, Yao W, Hook KD, Vik R, Winnerdy FR, Brown JQ, Gibb BC, Pursell ZF, Phan AT, Jayawickramarajah J]
通讯作者:
Jayawickramarajah J
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批准号:8627614
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资助金额:$28.29万
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负责人:BRUCE C GIBB
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依托单位:
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批准号:8258409
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依托单位:
Using deep-cavity cavitands to study supramolecular chemistry in water
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依托单位:
海外基金