Emory/Georgia TB Research Advancement Center (TRAC)
Emory/Georgia TB Research Advancement Center (TRAC)
批准号:
10429404
负责人:
Rafick Pierre Sekaly
金额:
$19.73万
依托单位:
依托单位国家:
美国
项目类别:
财政年份:
2022
资助国家:
美国
项目状态:
未结题
起止时间:
2022-03-23 至 2027-02-28
关键词:
ATAC-seqAddressAreaBasic ScienceBioinformaticsBiological AssayBiological MarkersCellsCellular Indexing of Transcriptomes and Epitopes by SequencingClinicalClinical SciencesCommunicable DiseasesCommunitiesComplexComputational BiologyComputer ModelsConsultConsultationsCore FacilityDataData AnalysesData SetDevelopmentDiagnosisDiseaseDisease ProgressionDoctor of PhilosophyEducationEducational workshopEnvironmentExperimental DesignsFacultyFlow CytometryFosteringFunctional disorderFundingGenesGenomicsImmune EvasionImmunityImmunologyImmunology procedureIndividualInfrastructureInstitutionIntakeInterdisciplinary StudyInvestigationKnowledgeLaboratoriesLeadLeadershipMeasurementMentorshipMetabolic PathwayMethodsModelingMultiomic DataPathway AnalysisPostdoctoral FellowPreventionRecordsResearchResearch DesignResearch PersonnelResearch TrainingResolutionResource SharingResourcesServicesStructureSystemSystems BiologyTechnologyTissuesTrainingTranslational ResearchTuberculosisUnited States National Institutes of HealthWorld Health Organizationcomputational pipelinescytokinedata acquisitiondata integrationeducation resourcesepigenomicsexperimental studygraduate studenthigh dimensionalityinnovationlipidomelipidomicsmembermetabolic phenotypemetabolomemetabolomicsmicrobiome analysismultidimensional datamultiple omicsmultiscale datanext generationnovelsingle cell technologytooltranscriptome sequencingtranscriptomicsuptake
中文摘要
生物信息学和综合系统生物学(系统生物学)核心将代表一个完整的
埃默里/佐治亚州 TRAC 的组成部分。埃默里/佐治亚州结核病研究的个别成员
社区拥有协作结核病研究的良好记录,可以使用系统中的尖端方法
生物学并不容易获得。尽管埃默里/佐治亚州 TRAC 的合作机构主办了
执行“组学”分析的各种核心设施,分析所需的计算生物学专业知识
并整合这些平台产生的高维、多尺度数据集通常并不容易
可用。我们建议为高维、多尺度的数据分析和分析提供必要的支持
整合以促进埃默里/佐治亚州 TRAC 研究人员使用“组学”技术。系统
Biology Core 将通过充当研究人员的单一联络点(礼宾功能)来实现这一目标
埃默里/佐治亚州 TRAC,并促进特定人群获得广泛的“组学”技术
实验设计。使用已建立的计算管道,我们将为新研究人员提供培训
在这个日益重要的基础领域中研究高维数据分析和数据集成的方法
和转化研究。 BISB 核心的具体目标是: 1) 提供单点联系
TRAC 研究人员的所有“组学”平台的数据采集、管理和分析结构; 2) 至
为 TRAC 成员提供培训和教育资源,以使用“-”进行前沿实验
组学的技术并实施相关的计算管道; 3) 制定和实施
新颖的多组学检测和相关计算模型可推进结核病研究。我们将努力
通过促进使用,在埃默里/佐治亚州 TRAC 研究人员之间培育协作研究环境
并实施尖端的多组学检测,以推进结核病研究并培训下一代
结核病研究人员。
英文摘要
The Bioinformatics and Integrated Systems Biology (Systems Biology) Core will represent an integral
component of the Emory/Georgia TRAC. While individual members of the Emory/Georgia TB research
community have strong records of collaborative TB research, access to cutting edge methods in systems
biology have not been easily accessible. Although the partner institutions of the Emory/Georgia TRAC host a
wide variety of Core facilities performing ‘-omics’ assays, expertise in computational biology needed to analyze
and integrate the high-dimensional, multiscale data sets produced by these platforms is often not readily
available. We propose to provide essential support for high-dimensional, multiscale data analysis and
integration to facilitate use of ‘-omics’ technologies among Emory/Georgia TRAC investigators. The Systems
Biology Core will accomplish this by serving as a single point of contact (concierge function) to investigators of
the Emory/Georgia TRAC, and facilitating access to a wide array of ‘-omics’ technologies for specific
experimental designs. Using established computational pipelines, we will provide training to new investigators
on methods in high-dimensional data analysis and data integration in this increasingly essential area of basic
and translational research. The specific aims of the BISB Core are: 1) to provide a single point of contact
structure for data acquisition, management, and analysis for all ‘-omics’ platforms to TRAC investigators; 2) To
provide training and educational resources to TRAC members to carry out cutting edge experiments using ‘-
omics’ technologies and implement associated computational pipelines; and 3) to develop and implement
novel multiomics assays and associated computational models to advance TB research. We will strive to
nurture a collaborative research environment among Emory/Georgia TRAC investigators by facilitating the use
and implementation of cutting edge multiomics assays to advance TB research and train the next generation of
TB researchers.
期刊论文(0)
专著(0)
科研奖励(0)
会议论文
MultiOMICS mechanistic identification of predictors of HIV DNA decay, restoration of immune homeostasis and HIV specific immunity in PWH with cancer receiving Immune check point therapy
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批准号:10731665
-
项目类别:
-
资助金额:$42.08万
-
财政年份:2023
-
负责人:Rafick Pierre Sekaly
-
依托单位:
Harnessing IL-10 in cART treated SIV infected macaques to restore immunity and to eradicate HIV
-
批准号:10588314
-
项目类别:
-
资助金额:$79.33万
-
财政年份:2023
-
负责人:Rafick Pierre Sekaly
-
依托单位:
Multi-OMICS identification and validation of mechanisms triggered by Immune interventions aimed at reducing the size of the replication competent Reservoir
-
批准号:10731661
-
项目类别:
-
资助金额:$129.39万
-
财政年份:2023
-
负责人:Rafick Pierre Sekaly
-
依托单位:
MOIR - Administrative Core
-
批准号:10731662
-
项目类别:
-
资助金额:$9.62万
-
财政年份:2023
-
负责人:Rafick Pierre Sekaly
-
依托单位:
I2 Control= Modulating Innate Immunity to Achieve Control of HIV
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批准号:10731664
-
项目类别:
-
资助金额:$45.37万
-
财政年份:2023
-
负责人:Rafick Pierre Sekaly
-
依托单位:
Emory/Georgia TB Research Advancement Center (TRAC)
-
批准号:10596182
-
项目类别:
-
资助金额:$8.72万
-
财政年份:2022
-
负责人:Rafick Pierre Sekaly
-
依托单位:
A multi-tiered approach to develop validated assays to predict efficacy of a tetravalent live attenuated Dengue Virus vaccine in Phase II and Phase III clinical trials
-
批准号:10341373
-
项目类别:
-
资助金额:$104.7万
-
财政年份:2021
-
负责人:Rafick Pierre Sekaly
-
依托单位:
Investigating the impact of helminth infection on microbioma composition and innate immunity generated during HepB vaccination.
-
批准号:10163555
-
项目类别:
-
资助金额:$31.15万
-
财政年份:2020
-
负责人:Rafick Pierre Sekaly
-
依托单位:
Immune Regulation of COVID-19 Infection in Cancer and Autoimmunity
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批准号:10222321
-
项目类别:
-
资助金额:$79.55万
-
财政年份:2020
-
负责人:Rafick Pierre Sekaly
-
依托单位:
An unbiased OMICs approach to identify mechanisms of Cocaine regulation of the HIV reservoir
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批准号:10321500
-
项目类别:
-
资助金额:$74.39万
-
财政年份:2020
-
负责人:Rafick Pierre Sekaly
-
依托单位:
OMICs to define impact of cocaine on immunity and HIV persistence in treated HIV infection
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批准号:10321501
-
项目类别:
-
资助金额:$53.2万
-
财政年份:2020
-
负责人:Rafick Pierre Sekaly
-
依托单位:
Immune Regulation of COVID-19 Infection in Cancer and Autoimmunity
-
批准号:10680632
-
项目类别:
-
资助金额:$35.92万
-
财政年份:2020
-
负责人:Rafick Pierre Sekaly
-
依托单位:
Core C - Modeling Core
-
批准号:10080706
-
项目类别:
-
资助金额:$41.09万
-
财政年份:2018
-
负责人:Rafick Pierre Sekaly
-
依托单位:
Harnessing IL-10 in cART treated SIV infected macaques to restore immunity and to eradicate HIV
-
批准号:9623814
-
项目类别:
-
资助金额:$87.52万
-
财政年份:2018
-
负责人:Rafick Pierre Sekaly
-
依托单位:
Harnessing IL-10 in cART treated SIV infected macaques to restore immunity and to eradicate HIV
-
批准号:10198704
-
项目类别:
-
资助金额:$154.03万
-
财政年份:2018
-
负责人:Rafick Pierre Sekaly
-
依托单位:
Core C - Modeling Core
-
批准号:10322684
-
项目类别:
-
资助金额:$40.56万
-
财政年份:2018
-
负责人:Rafick Pierre Sekaly
-
依托单位:
Harnessing IL-10 in cART treated SIV infected macaques to restore immunity and to eradicate HIV
-
批准号:9979743
-
项目类别:
-
资助金额:$63.67万
-
财政年份:2018
-
负责人:Rafick Pierre Sekaly
-
依托单位:
Harnessing IL-10 in cART treated SIV infected macaques to restore immunity and to eradicate HIV
-
批准号:10336870
-
项目类别:
-
资助金额:$30.85万
-
财政年份:2018
-
负责人:Rafick Pierre Sekaly
-
依托单位:
Harnessing IL-10 in cART treated SIV infected macaques to restore immunity and to eradicate HIV
-
批准号:10463861
-
项目类别:
-
资助金额:$76.96万
-
财政年份:2018
-
负责人:Rafick Pierre Sekaly
-
依托单位:
Resetting immune homeostasis: a non-invasive approach towards HIV eradication
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批准号:10303927
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项目类别:
-
资助金额:$134.71万
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财政年份:2017
-
负责人:Rafick Pierre Sekaly
-
依托单位:
海外基金