Emory/Georgia TB Research Advancement Center (TRAC)
Emory/Georgia TB Research Advancement Center (TRAC)
批准号:
10429404
负责人:
Rafick Pierre Sekaly
金额:
$19.73万
依托单位:
依托单位国家:
美国
项目类别:
财政年份:
2022
资助国家:
美国
项目状态:
未结题
起止时间:
2022-03-23 至 2027-02-28
关键词:
ATAC-seqAddressAreaBasic ScienceBioinformaticsBiological AssayBiological MarkersCellsCellular Indexing of Transcriptomes and Epitopes by SequencingClinicalClinical SciencesCommunicable DiseasesCommunitiesComplexComputational BiologyComputer ModelsConsultConsultationsCore FacilityDataData AnalysesData SetDevelopmentDiagnosisDiseaseDisease ProgressionDoctor of PhilosophyEducationEducational workshopEnvironmentExperimental DesignsFacultyFlow CytometryFosteringFunctional disorderFundingGenesGenomicsImmune EvasionImmunityImmunologyImmunology procedureIndividualInfrastructureInstitutionIntakeInterdisciplinary StudyInvestigationKnowledgeLaboratoriesLeadLeadershipMeasurementMentorshipMetabolic PathwayMethodsModelingMultiomic DataPathway AnalysisPostdoctoral FellowPreventionRecordsResearchResearch DesignResearch PersonnelResearch TrainingResolutionResource SharingResourcesServicesStructureSystemSystems BiologyTechnologyTissuesTrainingTranslational ResearchTuberculosisUnited States National Institutes of HealthWorld Health Organizationcomputational pipelinescytokinedata acquisitiondata integrationeducation resourcesepigenomicsexperimental studygraduate studenthigh dimensionalityinnovationlipidomelipidomicsmembermetabolic phenotypemetabolomemetabolomicsmicrobiome analysismultidimensional datamultiple omicsmultiscale datanext generationnovelsingle cell technologytooltranscriptome sequencingtranscriptomicsuptake
中文摘要
生物信息学和综合系统生物学(系统生物学)核心将代表一个完整的
埃默里/佐治亚州TRAC的组成部分。虽然埃默里/佐治亚州结核病研究的个别成员
社区在合作结核病研究、获取系统中的尖端方法方面有着良好的记录
生物并不是很容易理解的。尽管埃默里/格鲁吉亚核心预算资源调拨目标的伙伴机构主办了
进行组学分析的各种核心设施,需要分析的计算生物学专业知识
而集成由这些平台产生的高维、多尺度的数据集通常并不容易
可用。我们建议为高维、多尺度数据分析和
整合,以促进埃默里/佐治亚州TRAC调查人员使用“组学”技术。《系统》
BioCore将通过作为调查人员的单一联系点(礼宾职能)来实现这一点
埃默里/佐治亚州TRAC,并促进获得针对特定领域的广泛的“组学”技术
实验设计。利用已建立的计算管道,我们将为新的调查人员提供培训
关于高维数据分析和数据集成的方法在这一日益重要的基础领域
和翻译研究。BISB核心的具体目标是:1)提供单一联系点
为TRAC调查员提供所有“组学”平台的数据获取、管理和分析的结构;2)
为核心目标咨询委员会成员提供培训和教育资源,利用‘-
组学的技术和实现相关的计算管道;以及3)开发和实施
推进结核病研究的新的多组学分析和相关计算模型。我们将努力
促进埃默里/佐治亚州TRAC调查人员之间的合作研究环境
和实施尖端的多组学分析,以推进结核病研究和培训下一代
结核病研究人员。
英文摘要
The Bioinformatics and Integrated Systems Biology (Systems Biology) Core will represent an integral
component of the Emory/Georgia TRAC. While individual members of the Emory/Georgia TB research
community have strong records of collaborative TB research, access to cutting edge methods in systems
biology have not been easily accessible. Although the partner institutions of the Emory/Georgia TRAC host a
wide variety of Core facilities performing ‘-omics’ assays, expertise in computational biology needed to analyze
and integrate the high-dimensional, multiscale data sets produced by these platforms is often not readily
available. We propose to provide essential support for high-dimensional, multiscale data analysis and
integration to facilitate use of ‘-omics’ technologies among Emory/Georgia TRAC investigators. The Systems
Biology Core will accomplish this by serving as a single point of contact (concierge function) to investigators of
the Emory/Georgia TRAC, and facilitating access to a wide array of ‘-omics’ technologies for specific
experimental designs. Using established computational pipelines, we will provide training to new investigators
on methods in high-dimensional data analysis and data integration in this increasingly essential area of basic
and translational research. The specific aims of the BISB Core are: 1) to provide a single point of contact
structure for data acquisition, management, and analysis for all ‘-omics’ platforms to TRAC investigators; 2) To
provide training and educational resources to TRAC members to carry out cutting edge experiments using ‘-
omics’ technologies and implement associated computational pipelines; and 3) to develop and implement
novel multiomics assays and associated computational models to advance TB research. We will strive to
nurture a collaborative research environment among Emory/Georgia TRAC investigators by facilitating the use
and implementation of cutting edge multiomics assays to advance TB research and train the next generation of
TB researchers.
期刊论文(0)
专著(0)
科研奖励(0)
会议论文
MultiOMICS mechanistic identification of predictors of HIV DNA decay, restoration of immune homeostasis and HIV specific immunity in PWH with cancer receiving Immune check point therapy
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批准号:10731665
-
项目类别:
-
资助金额:$42.08万
-
财政年份:2023
-
负责人:Rafick Pierre Sekaly
-
依托单位:
Harnessing IL-10 in cART treated SIV infected macaques to restore immunity and to eradicate HIV
-
批准号:10588314
-
项目类别:
-
资助金额:$79.33万
-
财政年份:2023
-
负责人:Rafick Pierre Sekaly
-
依托单位:
Multi-OMICS identification and validation of mechanisms triggered by Immune interventions aimed at reducing the size of the replication competent Reservoir
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批准号:10731661
-
项目类别:
-
资助金额:$129.39万
-
财政年份:2023
-
负责人:Rafick Pierre Sekaly
-
依托单位:
MOIR - Administrative Core
-
批准号:10731662
-
项目类别:
-
资助金额:$9.62万
-
财政年份:2023
-
负责人:Rafick Pierre Sekaly
-
依托单位:
I2 Control= Modulating Innate Immunity to Achieve Control of HIV
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批准号:10731664
-
项目类别:
-
资助金额:$45.37万
-
财政年份:2023
-
负责人:Rafick Pierre Sekaly
-
依托单位:
Emory/Georgia TB Research Advancement Center (TRAC)
-
批准号:10596182
-
项目类别:
-
资助金额:$8.72万
-
财政年份:2022
-
负责人:Rafick Pierre Sekaly
-
依托单位:
A multi-tiered approach to develop validated assays to predict efficacy of a tetravalent live attenuated Dengue Virus vaccine in Phase II and Phase III clinical trials
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批准号:10341373
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项目类别:
-
资助金额:$104.7万
-
财政年份:2021
-
负责人:Rafick Pierre Sekaly
-
依托单位:
Investigating the impact of helminth infection on microbioma composition and innate immunity generated during HepB vaccination.
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批准号:10163555
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项目类别:
-
资助金额:$31.15万
-
财政年份:2020
-
负责人:Rafick Pierre Sekaly
-
依托单位:
Immune Regulation of COVID-19 Infection in Cancer and Autoimmunity
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批准号:10222321
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项目类别:
-
资助金额:$79.55万
-
财政年份:2020
-
负责人:Rafick Pierre Sekaly
-
依托单位:
An unbiased OMICs approach to identify mechanisms of Cocaine regulation of the HIV reservoir
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批准号:10321500
-
项目类别:
-
资助金额:$74.39万
-
财政年份:2020
-
负责人:Rafick Pierre Sekaly
-
依托单位:
OMICs to define impact of cocaine on immunity and HIV persistence in treated HIV infection
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批准号:10321501
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项目类别:
-
资助金额:$53.2万
-
财政年份:2020
-
负责人:Rafick Pierre Sekaly
-
依托单位:
Immune Regulation of COVID-19 Infection in Cancer and Autoimmunity
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批准号:10680632
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项目类别:
-
资助金额:$35.92万
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财政年份:2020
-
负责人:Rafick Pierre Sekaly
-
依托单位:
Core C - Modeling Core
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批准号:10080706
-
项目类别:
-
资助金额:$41.09万
-
财政年份:2018
-
负责人:Rafick Pierre Sekaly
-
依托单位:
Core C - Modeling Core
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批准号:10322684
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项目类别:
-
资助金额:$40.56万
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财政年份:2018
-
负责人:Rafick Pierre Sekaly
-
依托单位:
Harnessing IL-10 in cART treated SIV infected macaques to restore immunity and to eradicate HIV
-
批准号:9623814
-
项目类别:
-
资助金额:$87.52万
-
财政年份:2018
-
负责人:Rafick Pierre Sekaly
-
依托单位:
Harnessing IL-10 in cART treated SIV infected macaques to restore immunity and to eradicate HIV
-
批准号:10198704
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项目类别:
-
资助金额:$154.03万
-
财政年份:2018
-
负责人:Rafick Pierre Sekaly
-
依托单位:
Harnessing IL-10 in cART treated SIV infected macaques to restore immunity and to eradicate HIV
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批准号:9979743
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项目类别:
-
资助金额:$63.67万
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财政年份:2018
-
负责人:Rafick Pierre Sekaly
-
依托单位:
Harnessing IL-10 in cART treated SIV infected macaques to restore immunity and to eradicate HIV
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批准号:10336870
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项目类别:
-
资助金额:$30.85万
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财政年份:2018
-
负责人:Rafick Pierre Sekaly
-
依托单位:
Harnessing IL-10 in cART treated SIV infected macaques to restore immunity and to eradicate HIV
-
批准号:10463861
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项目类别:
-
资助金额:$76.96万
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财政年份:2018
-
负责人:Rafick Pierre Sekaly
-
依托单位:
Resetting immune homeostasis: a non-invasive approach towards HIV eradication
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批准号:10303927
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项目类别:
-
资助金额:$134.71万
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财政年份:2017
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负责人:Rafick Pierre Sekaly
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依托单位:
海外基金