Statistical methods to localize disease heritability and identify biological mechanisms
Statistical methods to localize disease heritability and identify biological mechanisms
批准号:
10431843
负责人:
Benjamin Michael Neale
金额:
$84.67万
依托单位:
依托单位国家:
美国
项目类别:
财政年份:
2015
资助国家:
美国
项目状态:
已结题
起止时间:
2015-07-01 至 2023-08-01
关键词:
AreaAttention deficit hyperactivity disorderBindingBiologicalBiological ProcessBipolar DisorderChromatinCollaborationsCommunitiesComplexComputer softwareDataData SetDiseaseEnsureFrequenciesGene Expression RegulationGenesGeneticGenetic VariationGenetic studyGenotypeGrowthHaplotypesHeritabilityHuman GenomeIndividualLearningLocalized DiseaseMajor Depressive DisorderMental disordersMethodsPopulationPositioning AttributePsychopathologyPublicationsResearchRiskSamplingSchizophreniaStatistical MethodsTechnologyTissuesTrans-Omics for Precision MedicineVariantWorkautism spectrum disorderbasebiobankdisorder riskepigenomicsexome sequencinggenetic variantgenome sequencinggenome wide association studygenome-widehuman diseaseinsightnext generationnovelopen sourceopen source toolprogramspsychiatric genomicsrare variantstatisticstraittranscription factorwhole genome
中文摘要
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英文摘要
ABSTRACT
Genetic studies of both common and rare genetic variation have been extremely successful in identifying
genes and variants associated to schizophrenia, autism and other psychiatric disorders. Nevertheless, for
most psychiatric disorders, the vast majority of genetic effects are as yet undetected. Our specific aims are
to 1) quantify the heritability explained by rare and functional classes of variation; 2) boost association
power via leveraging related traits; and 3) infer biological mechanisms via local fine-mapping and genome-
wide causal inference. We will guide our research using >800,000 samples from genome-wide association,
exome sequencing and genome sequencing studies of psychiatric disease. The methods we propose to
develop will be implemented in software packages that we will make widely available to the community.
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DOI:
10.1038/s41588-018-0081-4
发表时间:
2018-04
期刊:
Nature genetics
影响因子:
30.8
作者:
[Finucane HK, Reshef YA, Anttila V, Slowikowski K, Gusev A, Byrnes A, Gazal S, Loh PR, Lareau C, Shoresh N, Genovese G, Saunders A, Macosko E, Pollack S, Brainstorm Consortium, Perry JRB, Buenrostro JD, Bernstein BE, Raychaudhuri S, McCarroll S, Neale BM, Price AL]
通讯作者:
Price AL
DOI:
10.1093/bioinformatics/btw613
发表时间:
2017-01-15
期刊:
Bioinformatics (Oxford, England)
影响因子:
--
作者:
[Zheng J, Erzurumluoglu AM, Elsworth BL, Kemp JP, Howe L, Haycock PC, Hemani G, Tansey K, Laurin C, Early Genetics and Lifecourse Epidemiology (EAGLE) Eczema Consortium, Pourcain BS, Warrington NM, Finucane HK, Price AL, Bulik-Sullivan BK, Anttila V, Paternoster L, Gaunt TR, Evans DM, Neale BM]
通讯作者:
Neale BM
DOI:
10.1038/s41467-018-06159-4
发表时间:
2018-10-02
期刊:
Nature communications
影响因子:
16.6
作者:
[Regier AA, Farjoun Y, Larson DE, Krasheninina O, Kang HM, Howrigan DP, Chen BJ, Kher M, Banks E, Ames DC, English AC, Li H, Xing J, Zhang Y, Matise T, Abecasis GR, Salerno W, Zody MC, Neale BM, Hall IM]
通讯作者:
Hall IM
Detecting genome-wide directional effects of transcription factor binding on polygenic disease risk.
DOI:
10.1038/s41588-018-0196-7
发表时间:
2018-10
期刊:
Nature genetics
影响因子:
30.8
作者:
[Reshef YA, Finucane HK, Kelley DR, Gusev A, Kotliar D, Ulirsch JC, Hormozdiari F, Nasser J, O'Connor L, van de Geijn B, Loh PR, Grossman SR, Bhatia G, Gazal S, Palamara PF, Pinello L, Patterson N, Adams RP, Price AL]
通讯作者:
Price AL
Author Correction: Distinguishing genetic correlation from causation across 52 diseases and complex traits.
作者更正:区分 52 种疾病和复杂性状的遗传相关性和因果关系。
DOI:
10.1038/s41588-018-0296-4
发表时间:
2018
期刊:
Nature genetics
影响因子:
30.8
作者:
[O'Connor,LukeJ, Price,AlkesL]
通讯作者:
Price,AlkesL
共 10 条
Statistical methods to localize disease heritability and identify biological mechanisms
-
批准号:10834328
-
项目类别:
-
资助金额:$83.54万
-
财政年份:2015
-
负责人:Benjamin Michael Neale
-
依托单位:
Statistical methods to localize disease heritability and identify biological mechanisms
-
批准号:10379539
-
项目类别:
-
资助金额:$12.54万
-
财政年份:2015
-
负责人:Benjamin Michael Neale
-
依托单位:
Methods for linking GWAS peaks to function in psychiatric disease
-
批准号:8944830
-
项目类别:
-
资助金额:$74.6万
-
财政年份:2015
-
负责人:Benjamin Michael Neale
-
依托单位:
Functional and population genetic architectures of complex disease
-
批准号:10675744
-
项目类别:
-
资助金额:$80.48万
-
财政年份:2013
-
负责人:Benjamin Michael Neale
-
依托单位:
Quantifying the impact of rare mutations on ADHD
-
批准号:8664000
-
项目类别:
-
资助金额:$17.6万
-
财政年份:2012
-
负责人:Benjamin Michael Neale
-
依托单位:
Quantifying the impact of rare mutations on ADHD
-
批准号:8871524
-
项目类别:
-
资助金额:$39.4万
-
财政年份:2012
-
负责人:Benjamin Michael Neale
-
依托单位:
Quantifying the impact of rare mutations on ADHD
-
批准号:8471783
-
项目类别:
-
资助金额:$56.49万
-
财政年份:2012
-
负责人:Benjamin Michael Neale
-
依托单位:
Quantifying the impact of rare mutations on ADHD
-
批准号:8297528
-
项目类别:
-
资助金额:$67.8万
-
财政年份:2012
-
负责人:Benjamin Michael Neale
-
依托单位:
Quantifying the impact of rare mutations on ADHD
-
批准号:8659504
-
项目类别:
-
资助金额:$58.12万
-
财政年份:2012
-
负责人:Benjamin Michael Neale
-
依托单位:
Common Complex Trait Genetics of Reproductive Phenotypes
-
批准号:9910433
-
项目类别:
-
资助金额:$25.65万
-
财政年份:--
-
负责人:Benjamin Michael Neale
-
依托单位:
Common Complex Trait Genetics of Reproductive Phenotypes
-
批准号:9180127
-
项目类别:
-
资助金额:$25.07万
-
财政年份:--
-
负责人:Benjamin Michael Neale
-
依托单位:
Common Complex Trait Genetics of Reproductive Phenotypes
-
批准号:9322877
-
项目类别:
-
资助金额:$25.65万
-
财政年份:--
-
负责人:Benjamin Michael Neale
-
依托单位:
海外基金