Selective Stalling of Human Translation by Small Molecules
小分子对人类翻译的选择性停滞
基本信息
- 批准号:10443568
- 负责人:
- 金额:$ 29.41万
- 依托单位:
- 依托单位国家:美国
- 项目类别:
- 财政年份:2019
- 资助国家:美国
- 起止时间:2019-09-01 至 2023-06-30
- 项目状态:已结题
- 来源:
- 关键词:Amino Acid SequenceAmino Acid SubstitutionAmino AcidsBackBehaviorBindingBiochemicalBiological AssayCRISPR interferenceCellsClinicComplexCryoelectron MicroscopyDNA-Protein InteractionDataDevelopmentDiseaseDrug TargetingEffectivenessEscherichia coliExhibitsFRAP1 geneFamilyFoundationsFutureG protein coupled receptor kinaseGeneticHumanLibrariesMapsMessenger RNAModelingMolecularMutationNonsense CodonNucleotidesPathway interactionsPeptide Initiation FactorsPharmaceutical PreparationsPlayProtein FamilyProteinsProteomeQuality ControlRNA, Ribosomal, 23SReporterResolutionRibosomal ProteinsRibosomal RNARibosomesRoleSignal PathwayStructural ModelsStructureSystemTechnologyTestingTherapeuticTranslation InitiationTranslationsViral ProteinsVirusbasedrug candidateguided inquiryhuman diseaseinsightinterestmulticatalytic endopeptidase complexoverexpressionpolypeptidepreventprotein complexprotein degradationreconstitutionribosome profilingsmall moleculetherapeutic developmenttranscription factortranslation to humans
项目摘要
ABSTRACT
Protein targets for many human diseases remain “undruggable” due to their underlying biochemical behavior.
These limits to discovery of small molecule drugs hold back the promise of developing affordable therapeutics.
Here we propose to develop an entirely new mechanism of action that could enable targeting previously
“undruggable” proteins, by selectively blocking their translation by the human ribosome. Most drugs and drug
candidates known to modulate human translation target translation initiation factor complexes or upstream
signaling pathways such as mammalian target of Rapamycin (mTOR). These generally modulate translation of
a large number of mRNAs. To date, only one type of compound that selectively targets the ribosome–to induce
premature stop codon readthrough–is being evaluated in the clinic. We recently demonstrated that small
molecules can selectively stall the translation of human proteins, with very little off-target activity. The
compound we analyzed, PF-06446846 (PF846), directly and selectively inhibits the translation of PCSK9
during translation elongation, by stalling the ribosome on the nascent polypeptide residing in the ribosome exit
tunnel. However, it remains unclear how this and related compounds selectively stall translation. The few
examples of off-target proteins we identified as stalled by PF846 (less than 0.4 percent of the human
proteome) exhibit substantial primary structure variability, making it difficult to predict target sequences for
future development of selective ribosome-targeting drugs. We have preliminary evidence that PF846 interacts
with these diverse nascent chain sequences to induce ribosome stalling by subtly different mechanisms. We
propose to elucidate the full molecular mechanism of PF846 stalling of translation, so that this family of
compounds can be further optimized to target proteins whose expression or overexpression causes diverse
human diseases for which no treatments are now available. This family of compounds could also be optimized
to target viruses, which use human translation to synthesize their proteome. These efforts have the potential to
open up an entirely new mechanism of action for human therapeutic development.
抽象的
许多人类疾病的蛋白质靶点由于其潜在的生化行为而仍然“无法成药”。
小分子药物发现的这些限制阻碍了开发负担得起的治疗方法的前景。
在这里,我们建议开发一种全新的行动机制,可以实现先前的目标定位
“不可成药”的蛋白质,通过选择性地阻止人类核糖体的翻译。大多数药物和药物
已知调节人类翻译目标翻译起始因子复合物或上游的候选者
信号通路,例如哺乳动物雷帕霉素靶标 (mTOR)。这些通常调节翻译
大量的 mRNA。迄今为止,只有一种类型的化合物能够选择性地靶向核糖体——诱导
过早终止密码子通读——正在临床中进行评估。我们最近证明了小
分子可以选择性地阻止人类蛋白质的翻译,几乎没有脱靶活性。这
我们分析的化合物 PF-06446846 (PF846) 直接选择性地抑制 PCSK9 的翻译
在翻译延伸过程中,通过将核糖体停滞在核糖体出口处的新生多肽上
隧道。然而,目前尚不清楚该化合物和相关化合物如何选择性地阻止翻译。少数人
我们确定被 PF846 阻滞的脱靶蛋白的例子(不到人类蛋白质的 0.4%)
蛋白质组)表现出显着的一级结构变异性,使得预测目标序列变得困难
选择性核糖体靶向药物的未来发展。我们有初步证据表明 PF846 相互作用
利用这些不同的新生链序列通过细微不同的机制诱导核糖体停滞。我们
提议阐明 PF846 翻译停滞的完整分子机制,以便该家族
化合物可以进一步优化以针对其表达或过度表达导致不同的目标蛋白质
目前尚无治疗方法的人类疾病。该化合物家族还可以进行优化
以病毒为目标,病毒利用人类翻译来合成蛋白质组。这些努力有可能
为人类治疗发展开辟全新的作用机制。
项目成果
期刊论文数量(2)
专著数量(0)
科研奖励数量(0)
会议论文数量(0)
专利数量(0)
A highly efficient human cell-free translation system.
高效的人类无细胞翻译系统。
- DOI:10.1101/2023.02.09.527910
- 发表时间:2023
- 期刊:
- 影响因子:0
- 作者:Aleksashin,NikolayA;Chang,StaceyTsai-Lan;Cate,JamieHD
- 通讯作者:Cate,JamieHD
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JAMIE H CATE的其他文献
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{{ truncateString('JAMIE H CATE', 18)}}的其他基金
Selective Stalling of Human Translation by Small Molecules
小分子对人类翻译的选择性停滞
- 批准号:
10004692 - 财政年份:2019
- 资助金额:
$ 29.41万 - 项目类别:
Selective Stalling of Human Translation by Small Molecules
小分子对人类翻译的选择性停滞
- 批准号:
10194545 - 财政年份:2019
- 资助金额:
$ 29.41万 - 项目类别:
STRUCTURES OF THE E COLI 70S RIBOSOME IN FUNCTIONAL COMPLEXES
功能复合物中大肠杆菌 70S 核糖体的结构
- 批准号:
7954332 - 财政年份:2009
- 资助金额:
$ 29.41万 - 项目类别:
STRUCTURES OF THE E COLI 70S RIBOSOME IN FUNCTIONAL COMPLEXES
功能复合物中大肠杆菌 70S 核糖体的结构
- 批准号:
7721984 - 财政年份:2008
- 资助金额:
$ 29.41万 - 项目类别:
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