TR&D Project 1: Higher Throughput Multi-element Distribution & Quantitation at the Tissue Level
TR&D Project 1: Higher Throughput Multi-element Distribution & Quantitation at the Tissue Level
批准号:
10494056
负责人:
THOMAS V O'HALLORAN
金额:
$29.74万
依托单位国家:
美国
项目类别:
财政年份:
2020
资助国家:
美国
项目状态:
未结题
起止时间:
2020-07-01 至 2025-05-31
关键词:
3-DimensionalAblationAdoptedAutomobile DrivingBedsBiologicalBiological PreservationBiological ProcessBiological SciencesBrainCalibrationCellsChemistryCommunitiesComplementComplexComputer softwareCoupledCrustaceaDataData AnalysesData SetDevelopmentDiseaseElementsEnsureEquilibriumFresh WaterFunctional disorderGoalsGrainHeterogeneityHomeostasisHourImageImage AnalysisImaging TechniquesImaging technologyIndividualInductively Coupled Plasma Mass SpectrometryInstitutionInterruptionLasersLeadLeftLinkMapsMass Spectrum AnalysisMetabolicMetalsMethodsMultimodal ImagingMusOrganOrganismPathologyPhysiological ProcessesPlasmaPlayPreparationProceduresProcessProductionProtocols documentationPythonsReference StandardsReportingReproductionResearch PersonnelResolutionResourcesRiskRoleRye cerealSamplingSectioning techniqueServicesSpecificityStandardizationStructureSystemSystems IntegrationTechniquesTestingThree-Dimensional ImageThree-Dimensional ImagingTimeTissue SampleTissuesValidationVariantVisualizationWheatbasebeamlinebioimagingbiological systemscryogenicsdata acquisitiondata reductiondesigndetection limitdetectorimaging approachimaging capabilitiesimaging facilitiesimprovedopen sourcepathogenphotoacoustic imagingpreservationspatiotemporaltechnology research and developmenttime of flight mass spectrometrytissue reconstructiontrafficking
中文摘要
项目摘要-研发项目1
更高吞吐量的多元素分布和组织水平的定量
金属对具有高度调控的运输、定位和动态平衡的生理过程至关重要,
干扰或轻微变异会导致细胞和组织功能障碍,并最终导致疾病。这
技术研发项目将推动激光烧蚀感应耦合等离子体
飞行时间质谱学(LA-ICP-TOFMS)技术用于开发更高吞吐量的成像
金属在不同的生物医学应用中的能力。这种方法将对正在开发的方法进行补充
在R&D 2和3中,使生物医学研究人员能够平衡敏感度、选择性和空间分辨率
需要对金属在基本的生物过程中所起的作用有一个整体的理解。
使用我们的驾驶生物医学项目(DBP)作为试验台,该研发将集成LA-ICP-TOFMS组件
开发从独特组织类型获取快速定量2D多元素图的工作流程
以及不同的样品制备方法。使用低温LA池将能够进行低温分析
保存的样本,确保组织化学和结构得到保存。我们还将制定标准化的
组织特异性LA-ICPMS校准标准品的制备方法。我们的标准将得到验证
在光束线8-BM使用SXFM。一旦制定了用于标准生产和验证的协议,一套
将向社区提供大量组织特定的SXFM验证标准作为通用标准
外部LA-ICPMS校准标准。最后,因为体积较大的金属热点可能是
在2D图像中被错误描述或遗漏的,我们将开发3D成像LA-ICP-TOFMS技术
器官和生物体。为了生成3D图像,我们将使用由Rapid帮助的连续切片技术
TOFMS的图像采集能力,并整合了多通道图像分析软件
(PyElements)正在研发中。3D成像功能将支持更广泛的适用性
生物医学领域的生物成像技术。所有这些发展都将在
所有四个主题的项目(金属稳态或大脑功能失调;金属
寄主-病原体相互作用的调节;控制繁殖和发育的金属熔剂;以及金属
代谢病理学中的不平衡),支持制定组织特异性校准标准和
用于分析不同组织类型的二维切片的工作流。三维LA-ICP-TOFMS成像技术的研究进展
技术将与DBP主题C(控制繁殖和发育的金属熔剂)最为相关。
一旦成熟,Cryo-LA-ICP-TOFMS将作为一条服务线纳入西北大学的量化
生物元素成像中心。
英文摘要
PROJECT SUMMARY – TR&D PROJECT 1
Higher Throughput Multi-element Distributions & Quantitation at the Tissue Level
Metals are crucial for physiological processes with highly regulated trafficking, localization, and homeostasis,
where interruptions or slight variations lead to cell and tissue dysfunction and ultimately to disease. This
technology research & development (TR&D) project will advance laser ablation inductively coupled plasma
time-of-flight mass spectrometry (LA-ICP-TOFMS) techniques to develop increased throughput imaging
capacity for metals in diverse biomedical applications. This approach will complement those being developed
in TR&Ds 2 and 3, enabling biomedical researchers to balance sensitivity, selectivity, and spatial resolution
needs to develop a wholistic understanding of the role metals play in fundamental biological processes.
Using our Driving Biomedical Projects (DBP) as test beds, this TR&D will integrate LA-ICP-TOFMS components
to develop workflows for acquiring rapid quantitative 2D multi-elemental maps derived from unique tissue types
and different sample preparation methods. Use of a cryogenic LA cell will enable analysis of cryogenically
preserved samples, ensuring tissue chemistry and structure are preserved. We will also develop standardized
approaches for producing tissue-specific LA-ICP-MS calibration standards. Our standards will be validated
using SXFM at beamline 8-BM. Once protocols for standard production and validation are developed, a set
quantity of tissue specific SXFM-validated standards will be made available to the community as universal
external LA-ICP-MS calibration standards. Finally, because metal hotspots in larger volumes can be
misrepresented or missed in 2D images, we will develop 3D imaging LA-ICP-TOFMS techniques for whole
organs and organisms. To produce 3D images we will use serial sectioning techniques facilitated by the rapid
image acquisition capabilities of the TOFMS and incorporate multi-modality image analysis software
(PyElements) being developed in TR&D 2. 3D imaging capabilities will support a wider applicability of
bioimaging techniques for the biomedical community. All of these developments will take place in the context
of our DBPs, with projects from all four themes (Metal homeostasis or dysregulation in brain function; metal
modulation in host-pathogen interactions; metal fluxes controlling reproduction and development; and metal
imbalances in metabolic pathology), supporting development of tissue-specific calibration standards and
workflows for analyzing 2D sections of different tissue types. Development of 3D LA-ICP-TOFMS imaging
technology will be most relevant to DBP Theme C (metal fluxes controlling reproduction and development).
Once mature, the cryo-LA-ICP-TOFMS will be incorporated as a service line in Northwestern’s Quantitative
Bioelement Imaging Center.
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