NUCLEIC ACID STRUCTURE AND REACTIVITY

核酸结构和反应性

• 批准号: 2459328
• 负责人: THOMAS ROBERT CECH
• 金额: $ 27.23万
• 依托单位: UNIVERSITY OF COLORADO
• 依托单位国家: 美国
• 财政年份: 1980
• 资助国家: 美国
• 起止时间: 1980-08-01 至 1998-07-31
• 项目状态: 已结题
• 来源: https://reporter.nih.gov/project-details/2459328
• 关键词: Escherichia coli; RNA biosynthesis; RNA splicing; Saccharomyces; Tetrahymena; affinity labeling; autoradiography; chemical fingerprinting; chemical group; cofactor; enzyme mechanism; enzyme structure; evolution; gel electrophoresis; gene expression; genetic manipulation; genetic recombination; genetic strain; guanosine diphosphate; microorganism genetics; molecular cloning; nucleic acid hybridization; nucleic acid sequence; nucleoside analog; phosphorus; radionuclides; radiotracer; ribosomal RNA; ribozymes; temperature sensitive mutant; tissue /cell culture

The main goal of the project is to understand how specific RNA structures contribute to RNA catalysis. The major experimental system will continue to be the self-splicing IVS (intervening sequence) of Tetrahymena and ribozymes (RNA enzymes) derived from the IVS. Additional goals are to develop a set of sequence- specific RNA cleavage enzymes that may be useful as tools for RNA molecular biology and to explore the generality of RNA catalysis in new directions. Specific aims are the following: (1) Obtain a 3-dimensional view of the active site of the Tetrahymena IVS RNA with and without the substrates bound. Approaches will include chemical modification, cleavage of the RNA by an active-site-directed inhibitor, and UV crosslinking. (2) Identify nucleotides involved in substrate- binding and catalysis using site-specific and random mutagenesis. A particular model of the 3-dimensional structure of the catalytic core will be tested. (3) Further explore the activity of the ribozyme as a sequence-specific endoribonuclease. Twenty active- site variants with altered substrate specificity will be characterized. (4) Test the idea that nuclear mRNA splicing is at least in part catalyzed by small nuclear RNAs using the Saccharomyces cerevisiae system. (5) Test the idea that mRNA stability might in some cases be determined by the presence of self-cleavage sites. The Tetrahymena IVS RNA provides an unusually amenable system for learning about structure-function relationships in RNA and biological catalysis in general. It is likely that many of he findings will be applicable to other systems where RNA is in catalysis, including other RNA processing reactions and protein synthesis.

该项目的主要目标是了解特异性RNA是如何

项目成果

Self-splicing RNA and an RNA enzyme in Tetrahymena.

四膜虫中的自剪接 RNA 和 RNA 酶。

• DOI: 10.1111/j.1550-7408.1987.tb03204.x
• 发表时间: 1987
• 期刊: The Journal of protozoology
• 作者: Zaug,AJ;Cech,TR
• 通讯作者: Cech,TR

The intervening sequence excised from the ribosomal RNA precursor of Tetrahymena contains a 5-terminal guanosine residue not encoded by the DNA.

从四膜虫核糖体 RNA 前体中切除的插入序列含有一个不由 DNA 编码的 5 末端鸟苷残基。

• DOI: 10.1093/nar/10.9.2823
• 发表时间: 1982
• 期刊: Nucleic acids research
• 影响因子: 14.9
• 作者: Zaug,AJ;Cech,TR
• 通讯作者: Cech,TR

DNA-induced dimerization of the single-stranded DNA binding telomeric protein Pot1 from Schizosaccharomyces pombe.

• DOI: 10.1093/nar/gkr721
• 发表时间: 2012-01
• 期刊: Nucleic acids research
• 影响因子: 14.9
• 作者: Nandakumar J;Cech TR
• 通讯作者: Cech TR

Telomeric protein-DNA point contacts identified by photo-cross-linking using 5-bromodeoxyuridine.

使用 5-溴脱氧尿苷通过光交联鉴定端粒蛋白-DNA 点接触。

• DOI: 10.1021/bi00177a030
• 发表时间: 1994
• 期刊: Biochemistry
• 影响因子: 2.9
• 作者: Hicke,BJ;Willis,MC;Koch,TH;Cech,TR
• 通讯作者: Cech,TR

Oxytricha telomere-binding protein: separable DNA-binding and dimerization domains of the alpha-subunit.

尖毛虫端粒结合蛋白：α 亚基的可分离 DNA 结合和二聚化结构域。

• DOI: 10.1101/gad.7.5.870
• 发表时间: 1993
• 期刊: Genes & development
• 影响因子: 10.5
• 作者: Fang,G;Gray,JT;Cech,TR
• 通讯作者: Cech,TR