A platform for high throughput, cell type-restricted in vivo knockdown of pre- or postsynaptic gene expression

用于高通量、细胞类型限制的体内突触前或突触后基因表达敲除的平台

• 批准号: BB/M025454/1
• 负责人: Matthew Nolan
• 金额: $ 59.54万
• 依托单位: University of Edinburgh
• 依托单位国家: 英国
• 项目类别: Research Grant
• 财政年份: 2015
• 资助国家: 英国
• 起止时间: 2015 至 无数据
• 项目状态: 已结题
• 来源: https://gtr.ukri.org/projects?ref=BB%2FM025454%2F1
• 关键词: platform; throughput; cell; type; restricted

One of the most challenging problems in science is to understand how the molecules expressed by nerve cells in the brain enable thoughts and actions to take place. Addressing this challenge is of fundamental importance for understanding how brains work. It will also underpin future development of therapies for neurological and psychiatric disorders, and of biologically inspired computing technologies. However, while cells in the brain are very much like those in other organs, figuring out how molecules in cells contribute to brain functions is exceptionally challenging because of the brain's great complexity. Conventionally one could study the function of a molecule by finding drugs that bind to it, or by engineering animals from which the molecule is deleted. However, many brain functions involve signals being passed between different types of cell that are found nearby one another. With conventional approaches it is usually difficult and very time consuming to figure out which cell type mediates a molecules effects. Moreover, with these approaches a single model animal can usually only be used to study one molecular target.To address these issues we propose to develop a system for relatively low cost and efficient investigation of the role of any given molecule in signalling between a particular population of neurons and identified neurons with which they interact. This system will use viruses to introduce two types of genetic sequence into neurons. The first encodes short interfering RNAs. These are short genetic sequences that contain recognition sites that enable them to "knockdown" targeted molecules. They can be designed to knockdown expression of almost any molecule of interest. The second type of genetic sequence encodes proteins that act either as fluorescent labels or as light-sensitive neuronal activators. These proteins can be used to identify and control infected neurons. The particular power of our system comes from a novel approach we will use to control the cells in which these two types of genetic sequence are expressed. This system makes expression of both types of sequence require the presence of marker molecules called Cre and Flp. By introducing viruses into animals in which Cre and Flp label cell populations of interest, we can target expression of the virally delivered proteins and interfering RNAs to these populations.We propose to validate this new approach by developing new tools aimed at studying neural circuits in a brain area called the entorhinal cortex. This region is important for spatial cognition. Focussing on this region allows us to take advantage of well established experimental assays, while generating tools that should enable us to address previously very challenging questions. Our first aim will be to generate and characterise tools that knockdown expression of particular ion channels in only a single type of cell. Our second aim will be to make tools that knockdown expression of receptors at either the up- or downstream side of a connection between two distinct populations of neurons. The tools will also allow the upstream neurons to be activated specifically with light and the downstream neurons to be identified by their fluorescence in order to guide subsequent electrical recordings. Our third aim will be to carry out preliminary work to extend our approach to investigation of multiple molecular targets in parallel in the same animal.On completion of the project we aim to have introduced and validated a new toolset for high throughput and low cost investigation of the roles of signalling molecules at connections between defined neuronal populations. The platforms that we aim to establish will be of general utility for fundamental and applied research into molecular mechanisms of signalling between cell populations. Applications include investigation of mechanisms of cognitive function in the young and ageing brain, and development of novel models for drug development.

科学中最具挑战性的问题之一是了解大脑中神经细胞表达的分子如何使思想和行动发生。解决这一挑战对于理解大脑如何工作至关重要。它还将支持未来神经和精神疾病治疗的发展，以及生物启发的计算技术。然而，虽然大脑中的细胞与其他器官中的细胞非常相似，但由于大脑的巨大复杂性，弄清楚细胞中的分子如何促进大脑功能是非常具有挑战性的。传统上，人们可以通过寻找与分子结合的药物来研究分子的功能，或者通过工程动物来删除该分子。然而，许多大脑功能涉及在彼此附近发现的不同类型的细胞之间传递信号。使用常规方法，通常很难并且非常耗时地找出哪种细胞类型介导分子效应。此外，与这些方法一个单一的模型动物通常只能用于研究一个分子target.To解决这些问题，我们建议开发一个系统相对低成本和有效的调查任何给定的分子之间的作用，一个特定的群体的神经元和确定的神经元与它们相互作用的信号。该系统将使用病毒将两种类型的基因序列引入神经元。第一个编码短干扰RNA。这些是短的基因序列，含有识别位点，使它们能够“敲低”靶分子。它们可以被设计为敲低几乎任何感兴趣分子的表达。第二种类型的基因序列编码的蛋白质既可以作为荧光标记，也可以作为光敏神经元激活剂。这些蛋白质可用于识别和控制受感染的神经元。我们的系统的特殊力量来自于一种新的方法，我们将使用这种方法来控制表达这两种基因序列的细胞。该系统使得两种类型的序列的表达都需要称为Cre和Flp的标记分子的存在。通过将病毒引入Cre和Flp标记感兴趣细胞群的动物中，我们可以将病毒递送的蛋白质和干扰RNA的表达靶向这些population.We建议通过开发旨在研究称为内嗅皮层的大脑区域中的神经回路的新工具来验证这种新方法。这个区域对空间认知很重要。专注于这一领域使我们能够利用成熟的实验分析，同时生成工具，使我们能够解决以前非常具有挑战性的问题。我们的第一个目标将是产生和验证仅在单一类型细胞中敲低特定离子通道表达的工具。我们的第二个目标将是制造工具，在两个不同的神经元群体之间的连接的上游或下游侧敲低受体的表达。这些工具还将允许上游神经元特异性地被光激活，下游神经元通过其荧光被识别，以指导随后的电记录。我们的第三个目标将是开展初步工作，以扩大我们的方法，在同一animal.On项目完成后，我们的目标是平行的多个分子靶点的调查已经推出并验证了一个新的工具集的高通量和低成本的调查信号分子在定义的神经元群体之间的连接的作用。我们的目标是建立的平台将是一般效用的基础和应用研究细胞群体之间的信号传导的分子机制。其应用包括研究年轻和衰老大脑中认知功能的机制，以及开发药物开发的新模型。

项目成果

Synaptic integrative mechanisms for spatial cognition.

空间认知的突触整合机制。

• DOI: 10.1038/nn.4652
• 发表时间: 2017
• 期刊: Nature neuroscience
• 影响因子: 25
• 作者: Schmidt-Hieber C

Fan cells in layer 2 of lateral entorhinal cortex are critical for episodic-like memory

外侧内嗅皮层第 2 层的扇细胞对于情景记忆至关重要

• DOI: 10.1101/543777
• 发表时间: 2019
• 作者: Vandrey B

Telencephalic outputs from the medial entorhinal cortex are copied directly to the hippocampus.

• DOI: 10.7554/elife.73162
• 发表时间: 2022-02-21
• 期刊: eLife
• 影响因子: 7.7
• 作者: Tsoi SY;Öncül M;Svahn E;Robertson M;Bogdanowicz Z;McClure C;Sürmeli G
• 通讯作者: Sürmeli G

Fan Cells in Layer 2 of the Lateral Entorhinal Cortex Are Critical for Episodic-like Memory

外侧内嗅皮层第二层的扇形细胞对于情景记忆至关重要

• DOI: 10.1016/j.cub.2019.11.027
• 发表时间: 2020
• 期刊: Current Biology
• 影响因子: 9.2
• 作者: Vandrey B