FROZEN HYDRATED ELECTRON MICROSCOPY OF CA ATPASE
FROZEN HYDRATED ELECTRON MICROSCOPY OF CA ATPASE
批准号:
6171260
负责人:
David L. Stokes
金额:
$29.41万
依托单位国家:
美国
项目类别:
财政年份:
1991
资助国家:
美国
项目状态:
已结题
起止时间:
1991-07-01 至 2002-06-30
关键词:
affinity chromatography affinity labeling calcium flux calcium transporting ATPase charge coupled device camera computer program /software conformation cryoscopy crystallization electron microscopy enzyme structure fluorescent dye /probe gold image processing laboratory rabbit maleimides protein purification sarcoplasmic reticulum stoichiometry structural biology thapsigargin
中文摘要
点击翻译按钮获取中文摘要
英文摘要
DESCRIPTION providing ATP-dependent transport of various ions across a
variety of cellular and subcellular membranes. These pumps are responsible
for such important phenomena as the cell resting potential (Na+/K+-ATPase)
and muscle relaxation (Ca2+-ATPase). The calcium pump (Ca2+-ATPase) has
been an archetype for this family and has been characterized by every
conceivable means, including kinetics, spectroscopy, site-directed
mutagenesis and chemical modification. Our understanding of the molecular
mechanism, however, is hindered by our ignorance of the molecular structure.
This proposal aims to determine this structure by methods of electron
crystallography employing frozen-hydrated crystals of Ca2+-ATPase from
skeletal muscle sarcoplasmic reticulum. In particular, two crystal forms
are being studied. Thin, multilamellar crystals of purified,
detergent-solubilized Ca2+-ATPase diffract to high resolution and a
three-dimensional structure at 6 A resolution is proposed by modifying
standard electron crystallographic methods developed for two-dimensional
membrane proteins. Tubular crystals in the sarcoplasmic reticulum membrane
have previously been used for a 14 A structure and the organization of the
molecule will be further investigated by labelling Ca2+-ATPase with
site-specific compounds and locating these labels in 3D reconstructions.
The resolution of the structure from tubular crystals will also be improved
by using improved facilities for electron microscopy and improved strategies
for image analysis. Structures from these two crystal forms represent
different conformational states of Ca2+-ATPase, corresponding to major
intermediates in the reaction cycle. Thus, comparison of the resulting
structures will help to understand the structural basis for coupling ATP
hydrolysis to calcium transport. Given the homologies in amino acid
sequence and similarities in reaction mechanisms, these conclusions will
apply more broadly to other members of the family of P-type ion pumps (e.g.,
Na+/K+-ATPase, H+/K+-ATPase) and help develop a general mechanism for
ATP-dependent ion transport. In the case of copper transport, deficiencies
which lead either to Menkes or Wilson disease, a better understanding of
this mechanism may eventually help in developing strategies for treatment.
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Comparison of H+-ATPase and Ca2+-ATPase suggests that a large conformational change initiates P-type ion pump reaction cycles.
H-ATP酶和Ca2-ATP酶的比较表明,大的构象变化启动了P型离子泵反应循环。
DOI:
10.1016/s0960-9822(99)80307-8
发表时间:
1999
期刊:
Current biology : CB
影响因子:
--
作者:
[Stokes,DL, Auer,M, Zhang,P, Kühlbrandt,W]
通讯作者:
Kühlbrandt,W
Locating the thapsigargin-binding site on Ca(2+)-ATPase by cryoelectron microscopy.
通过冷冻电子显微镜定位 Ca(2)-ATP 酶上的毒胡萝卜素结合位点。
DOI:
10.1006/jmbi.2001.4558
发表时间:
2001
期刊:
Journal of molecular biology.
影响因子:
--
作者:
[Young,HS, Xu,C, Zhang,P, Stokes,DL]
通讯作者:
Stokes,DL
Keeping calcium in its place: Ca(2+)-ATPase and phospholamban.
将钙保持在适当的位置:Ca(2)-ATP 酶和受磷蛋白。
DOI:
10.1016/s0959-440x(97)80121-2
发表时间:
1997
期刊:
Current opinion in structural biology
影响因子:
6.8
作者:
[Stokes,DL]
通讯作者:
Stokes,DL
Structure of the Ca2+ pump of sarcoplasmic reticulum: a view along the lipid bilayer at 9-A resolution.
肌浆网 Ca2 泵的结构:沿脂质双层的 9-A 分辨率视图。
DOI:
10.1016/s0006-3495(98)77493-4
发表时间:
1998
期刊:
Biophysical journal.
影响因子:
--
作者:
[Ogawa,H, Stokes,DL, Sasabe,H, Toyoshima,C]
通讯作者:
Toyoshima,C
Two-dimensional crystallization of Ca-ATPase by detergent removal.
通过去垢剂去除实现 Ca-ATP 酶的二维结晶。
DOI:
10.1016/s0006-3495(98)74050-0
发表时间:
1998
期刊:
Biophysical journal
影响因子:
3.4
作者:
[Lacapère,JJ, Stokes,DL, Olofsson,A, Rigaud,JL]
通讯作者:
Rigaud,JL
共 13 条
Molecular Mechanisms of Ion Transport - Equipment supplement
-
批准号:10798994
-
项目类别:
-
资助金额:$8.98万
-
财政年份:2022
-
负责人:David L. Stokes
-
依托单位:
Molecular Mechanisms of Ion Transport
-
批准号:10330684
-
项目类别:
-
资助金额:$25.87万
-
财政年份:2022
-
负责人:David L. Stokes
-
依托单位:
Molecular Mechanisms of Ion Transport
-
批准号:10600000
-
项目类别:
-
资助金额:$70.34万
-
财政年份:2022
-
负责人:David L. Stokes
-
依托单位:
Metal Ion Transport by the Cation Diffusion Facilitator Family
-
批准号:10083216
-
项目类别:
-
资助金额:$43.42万
-
财政年份:2019
-
负责人:David L. Stokes
-
依托单位:
Metal Ion Transport by the Cation Diffusion Facilitator Family
-
批准号:10592636
-
项目类别:
-
资助金额:$1.43万
-
财政年份:2019
-
负责人:David L. Stokes
-
依托单位:
Metal Ion Transport by the Cation Diffusion Facilitator Family
-
批准号:10319967
-
项目类别:
-
资助金额:$43.42万
-
财政年份:2019
-
负责人:David L. Stokes
-
依托单位:
Potassium transport by the KdpFABC complex
-
批准号:10225328
-
项目类别:
-
资助金额:$34.14万
-
财政年份:2014
-
负责人:David L. Stokes
-
依托单位:
Potassium transport by the KdpFABC complex
-
批准号:9982340
-
项目类别:
-
资助金额:$34.14万
-
财政年份:2014
-
负责人:David L. Stokes
-
依托单位:
Structural Studies of P-Type ATPases
-
批准号:8712800
-
项目类别:
-
资助金额:$32.21万
-
财政年份:2014
-
负责人:David L. Stokes
-
依托单位:
High-throughput Pipeline for Electron Crystallography
-
批准号:8313999
-
项目类别:
-
资助金额:$29.7万
-
财政年份:2010
-
负责人:David L. Stokes
-
依托单位:
TRAINING PROGRAM IN MACROMOLECULAR STRUCTURE AND MECHANISM
-
批准号:8291301
-
项目类别:
-
资助金额:$17.86万
-
财政年份:2010
-
负责人:David L. Stokes
-
依托单位:
Transcontinental EM Initiative for Membrane Protein Structure
-
批准号:8146044
-
项目类别:
-
资助金额:$162.5万
-
财政年份:2010
-
负责人:David L. Stokes
-
依托单位:
Dual-Beam Scanning Electron Microscope for New York Structural Biology Center
-
批准号:7838100
-
项目类别:
-
资助金额:$196.84万
-
财政年份:2010
-
负责人:David L. Stokes
-
依托单位:
Training program in Molecular Biophysics
-
批准号:9319772
-
项目类别:
-
资助金额:$18.64万
-
财政年份:2010
-
负责人:David L. Stokes
-
依托单位:
High-throughput Pipeline for Electron Crystallography
-
批准号:8519132
-
项目类别:
-
资助金额:$19.45万
-
财政年份:2010
-
负责人:David L. Stokes
-
依托单位:
High-throughput Pipeline for Electron Crystallography
-
批准号:8150922
-
项目类别:
-
资助金额:$29.7万
-
财政年份:2010
-
负责人:David L. Stokes
-
依托单位:
Transcontinental EM Initiative for Membrane Protein Structure
-
批准号:8730170
-
项目类别:
-
资助金额:$12.84万
-
财政年份:2010
-
负责人:David L. Stokes
-
依托单位:
High-throughput Pipeline for Electron Crystallography
-
批准号:8991232
-
项目类别:
-
资助金额:$9.07万
-
财政年份:2010
-
负责人:David L. Stokes
-
依托单位:
TRAINING PROGRAM IN MACROMOLECULAR STRUCTURE AND MECHANISM
-
批准号:7694058
-
项目类别:
-
资助金额:$8.75万
-
财政年份:2010
-
负责人:David L. Stokes
-
依托单位:
NYU
-
批准号:8151936
-
项目类别:
-
资助金额:$32.57万
-
财政年份:2010
-
负责人:David L. Stokes
-
依托单位:
海外基金