Development of a high-performance data storage and sharing platform for the NERC/NBAF genomics community.
Development of a high-performance data storage and sharing platform for the NERC/NBAF genomics community.
批准号:
NE/L01288X/1
负责人:
Karim Gharbi
金额:
$18.11万
依托单位:
依托单位国家:
英国
项目类别:
Research Grant
财政年份:
2013
资助国家:
英国
项目状态:
已结题
起止时间:
2013 至 --
中文摘要
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英文摘要
We propose hardware and software assets to implement a robust and secure infrastructure to store, archive, and share next-generation, high volume genomics data at collaborating nodes of the NERC Biomolecular Analysis Facilities in Liverpool and Edinburgh. The new e-infrastructure, built on existing core systems, will support a multi-tier storage architecture for: efficient data access for local processing; secure on-site storage; high-speed file transfer to the end user, to public repositories (e.g. European Nucleotide Archive) and to cloud computing resources (e.g. Cloud Bio-Linux); and fast data upload to NBAF servers. The assets will consist of network and server-attached storage, and industry leading Aspera file transfer technology to deliver speeds many times faster than FTP or HTTP.
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DOI:
10.1534/g3.117.041780
发表时间:
2017-07-05
期刊:
G3 (Bethesda, Md.)
影响因子:
--
作者:
[Gutierrez AP, Turner F, Gharbi K, Talbot R, Lowe NR, Peñaloza C, McCullough M, Prodöhl PA, Bean TP, Houston RD]
通讯作者:
Houston RD
DOI:
10.1093/molbev/msu266
发表时间:
2015-01
期刊:
Molecular biology and evolution
影响因子:
10.7
作者:
[Duvaux L, Geissmann Q, Gharbi K, Zhou JJ, Ferrari J, Smadja CM, Butlin RK]
通讯作者:
Butlin RK
DOI:
10.1111/mec.13818
发表时间:
2017-01
期刊:
Molecular ecology
影响因子:
4.9
作者:
[Eyres I, Duvaux L, Gharbi K, Tucker R, Hopkins D, Simon JC, Ferrari J, Smadja CM, Butlin RK]
通讯作者:
Butlin RK
DOI:
10.1111/mec.14426
发表时间:
2018-03
期刊:
Molecular ecology
影响因子:
4.9
作者:
[Jordan CY, Lohse K, Turner F, Thomson M, Gharbi K, Ennos RA]
通讯作者:
Ennos RA
DOI:
10.1186/s12862-016-0784-z
发表时间:
2016-10-13
期刊:
BMC evolutionary biology
影响因子:
3.4
作者:
[Clucas GV, Younger JL, Kao D, Rogers AD, Handley J, Miller GD, Jouventin P, Nolan P, Gharbi K, Miller KJ, Hart T]
通讯作者:
Hart T
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