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The Functions of the Telomeric Protein TRF1

端粒蛋白 TRF1 的功能

基本信息

批准号：
7274798
负责人：
Jan Karlseder
金额：
$ 39.86万
依托单位：
SALK INSTITUTE FOR BIOLOGICAL STUDIES
依托单位国家：
美国
项目类别：
财政年份：
2003
资助国家：
美国
起止时间：
2003-09-19 至 2009-08-31
项目状态：
已结题

来源：
https://reporter.nih.gov/project-details/7274798
关键词：
Adverse effects Aging Alleles Apoptosis Binding Biology C-terminal Cell Survival Cells Chromosomal Stability Chromosome Structures Chromosomes Complex DNA Binding Domain Data Development Dominant-Negative Mutation Embryo Embryonic Development Excision Gene Deletion Genome Stability Goals Human In Vitro Invaded Knock-out Knowledge Learning Length Light Location Maintenance Malignant Neoplasms Methods Monitor Mouse Cell Line Mus N-terminal Numbers Phenotype Play Point Mutation Protein Region Proteins RNA Interference RNA-Directed DNA Polymerase Regulation Role Site Somatic Cell Structure System TERF1 gene Techniques Telomerase Telomere Shortening Telomeric Repeat Binding Protein 1 Telomeric-Repeat Binding Factor Testing Tumor Suppression alpha helix base blastocyst cell growth in vivo mutant numb protein research study telomere tissue culture tissue/cell culture tool tumor

项目摘要

DESCRIPTION (provided by applicant): The ends of linear chromosomes, telomeres, are structures essential for chromosome stability, aging and tumor suppression, made up of the sequence TTAGGG and interacting proteins. The very end of all telomeres consists of a single stranded overhang of the G rich 3' strand that can be up to 300 bases long. This 3' end invades the double stranded portion of the telomere, forming protective loops. Telomeres are maintained by telomerase, a reverse transcriptase that copies TTAGGG repeats to the chromosome ends. Telomerase is suppressed in most human somatic cells, leading to constant telomere shortening, giving rise to the tumor suppressive effect. The two telomeric repeat binding factors TRF1 and TRF2 bind to the double stranded portion of the telomere. The proteins interact with a number of different partners, leading to the formation of independent complexes. Both complexes have been implicated in telomere length regulation, and the TRF2 complex plays a protective role. Targeted deletion of TRF1 led to early embryonic lethality with features pointing at apoptosis, giving rise to our hypothesis that TRF1 is necessary for chromosome end protection. This proposal focuses on testing this hypothesis. Additionally, we will gain understanding in the role of TRF1 in the embryonic development. In AIM1 we will generate in vivo and in vitro tools to analyze TRF1 functions by creating a conditional deletion of the gene. The deletion will be made in the mouse and in tissue culture cells, and these systems together with blastocyst cultures will be used to analyze the effect of the TRF1 deletion on cell growth, viability, and chromosome structure. AIM2 focuses on structure function analysis of TRF1. We will use TRF1 mutants to rescue phenotypes resulting from the TRF1 deletion. These experiments will be performed in tissue culture systems, and moved into mice for rescue experiments. In AIM3 we plan to isolate TRF1 interacting factors that are involved in phenotypes derived from the deletion of TRF1. The TRF1 'knockout' is the first targeted deletion of a telomeric protein available. Results from this study are expected to shed light onto the integrity of the telomeric complex, and therefore contribute to the understanding of aging and cancer development.

描述（由申请人提供）：线性染色体的末端端粒是染色体稳定性、衰老和肿瘤抑制所必需的结构，由序列TTAGGG和相互作用蛋白组成。所有端粒的最末端由富含G的3'链的单链突出端组成，其可以长达300个碱基。这个3'端侵入端粒的双链部分，形成保护环。端粒由端粒酶维持，端粒酶是一种将TTAGGG重复序列复制到染色体末端的逆转录酶。端粒酶在大多数人体细胞中受到抑制，导致端粒不断缩短，从而产生肿瘤抑制作用。两个端粒重复序列结合因子TRF1和TRF2与端粒的双链部分结合。这些蛋白质与许多不同的伴侣相互作用，导致形成独立的复合物。这两种复合物都与端粒长度调节有关，TRF2复合物起保护作用。TRF1的靶向缺失导致早期胚胎死亡，其特征指向细胞凋亡，这引起了我们的假设，即TRF1是染色体末端保护所必需的。本提案的重点是检验这一假设。此外，我们将了解TRF1在胚胎发育中的作用。在AIM1中，我们将通过创建基因的条件性缺失来生成体内和体外工具来分析TRF1功能。将在小鼠和组织培养细胞中进行缺失，并将这些系统与胚泡培养物一起用于分析TRF1缺失对细胞生长、活力和染色体结构的影响。AIM2侧重于TRF1的结构功能分析。我们将使用TRF1突变体来挽救TRF1缺失导致的表型。这些实验将在组织培养系统中进行，并转移到小鼠中进行拯救实验。在AIM3中，我们计划分离TRF1相互作用因子，这些因子参与来自TRF1缺失的表型。TRF1“敲除”是第一个可用的端粒蛋白的靶向缺失。这项研究的结果有望揭示端粒复合物的完整性，从而有助于理解衰老和癌症的发展。

项目成果

期刊论文数量（7）

专著数量（0）

科研奖励数量（0）

会议论文数量（0）

专利数量（0）

Telomeres: protecting chromosomes against genome instability.

DOI：
10.1038/nrm2848
发表时间：
2010-03
期刊：
Nature reviews. Molecular cell biology
影响因子：
0
作者：
通讯作者：

Reduced histone biosynthesis and chromatin changes arising from a damage signal at telomeres.

DOI：
10.1038/nsmb.1897
发表时间：
2010-10
期刊：
Nature structural & molecular biology
影响因子：
16.8
作者：
通讯作者：

Moderate expression of TRF2 in the hematopoietic system increases development of large cell blastic T-cell lymphomas.

DOI：
10.18632/aging.100015
发表时间：
2009-01
期刊：
Aging
影响因子：
0
作者：
Begemann S;Galimi F;Karlseder J
通讯作者：
Karlseder J

Nascent Transcript Folding Plays a Major Role in Determining RNA Polymerase Elongation Rates.

新生转录本折叠在确定 RNA 聚合酶延伸率中发挥着重要作用。

DOI：
10.1016/j.molcel.2020.06.002
发表时间：
2020
期刊：
Molecular cell
影响因子：
16
作者：
Turowski,TomaszW;Petfalski,Elisabeth;Goddard,BenjaminD;French,SarahL;Helwak,Aleksandra;Tollervey,David
通讯作者：
Tollervey,David

Uncoupling of longevity and telomere length in C. elegans.

秀丽隐杆线虫中长寿和端粒长度的解偶联。