IDENTIFICATION OF HEPATITIS B VIRUS SUBGENOTYPE A3 IN RURAL GABON

加蓬农村地区乙型肝炎病毒 A3 亚型的鉴定

• 批准号: 7562378
• 负责人: CRISTIAN APETREI
• 金额: $ 3.04万
• 依托单位: TULANE UNIVERSITY OF LOUISIANA
• 依托单位国家: 美国
• 财政年份: 2007
• 资助国家: 美国
• 起止时间: 2007-05-01 至 2008-04-30
• 项目状态: 已结题
• 来源: https://reporter.nih.gov/project-details/7562378
• 关键词: African; Amino Acid Substitution; Cameroon; Central Africa; Child; Chronic Hepatitis; Computer Retrieval of Information on Scientific Projects Database; Democratic Republic of the Congo; Funding; Gabon; Genetic Recombination; Genotype; Grant; Hepatitis; Hepatitis B Surface Antigens; Hepatitis B Virus; Institution; Molecular; Phylogenetic Analysis; Reporting; Research; Research Personnel; Resources; Rural; Simian B disease; Source; Surveys; United States National Institutes of Health; Viral Load result; Virus; aged; case finding; forest; genome sequencing

This subproject is one of many research subprojects utilizing the resources provided by a Center grant funded by NIH/NCRR. The subproject and investigator (PI) may have received primary funding from another NIH source, and thus could be represented in other CRISP entries. The institution listed is for the Center, which is not necessarily the institution for the investigator. A hepatitis B virus (HBV) molecular survey was conducted in five remote villages in the equatorial forest in Gabon, Central Africa. Two hundred seventy out of 311 inhabitants (86.8%) were HBV-infected or had evidence of past HBV infection. Chronic hepatitis corresponding to hepatitis B surface antigen (HBsAg) positivity was suspected in 27 (8.6%) of the HBV-infected subjects. High HBV viral loads were detected mainly in children aged 47 years. The pre-S/S domains were sequenced in 13 cases and 12 strains belonged to HBV-A genotype. In one case we found evidence for recombination between genotypes A and E. Phylogenetic analysis revealed that Gabonese HBV strains were distinct from HBV-A subgenotypes (A1 and A2). These new HBV strains from Gabon clustered with previously reported HBV-A3 subgenotype strains from Cameroon and Democratic Republic of Congo. The analysis of the pre-S2 domain allowed us to determine two amino acid substitutions (N/152/S and N/174/T) specific to the Central African HBV-A3 subgenotype strains and one amino acid substitution (P/155/Q) unique to these new Gabonese HBV-A3 subgenotype isolates. Two full genome sequences of two new Gabonese HBV isolates are also presented and confirm the distinctive HBV-Gab-A3 cluster.

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