Hemolytic Anemia: Biochemical, Molecular and Proteomic Diagnostics

溶血性贫血：生化、分子和蛋白质组学诊断

• 批准号: 7934640
• 负责人: JEFFREY S FRIEDMAN
• 金额: $ 47.48万
• 依托单位: SCRIPPS RESEARCH INSTITUTE, THE
• 依托单位国家: 美国
• 财政年份: 2009
• 资助国家: 美国
• 起止时间: 2009-09-16 至 2012-08-31
• 项目状态: 已结题
• 来源: https://reporter.nih.gov/project-details/7934640
• 关键词: Affect; Anemia; Anemia, Hemolytic, Congenital; Arts; Automobile Driving; Biochemical; Blood specimen; Cell Membrane Proteins; Characteristics; Clinical; Data; Defect; Development; Diagnosis; Diagnostic; Diagnostic Procedure; Diagnostic Services; Disease; Enzymatic Biochemistry; Enzymes; Erythrocytes; Etiology; Evaluation; Failure; Finding by Cause; Future; Gel; Gene Proteins; Genes; Hemolysis; Hemolytic Anemia; Laboratories; Lesion; Measurement; Membrane Proteins; Methods; Molecular; Molecular Diagnosis; Molecular Profiling; Mutation; Newly Diagnosed; Pathogenesis; Pathway interactions; Patients; Pattern; Physiology; Procedures; Production; Protein Analysis; Proteins; Proteome; Proteomics; Reactive Oxygen Species; Reticulocytosis; Role; Sampling; Severities; Structural Protein; Subgroup; Techniques; Testing; Time; diagnosis evaluation; enzyme deficiency; experience; insight; migration; novel; novel strategies; oxidation; oxidative damage; protein expression; response; tool; transcription factor

DESCRIPTION (provided by applicant): Hemolytic Anemia: Biochemical, Molecular and Proteomic Diagnostics The hereditary hemolytic anemias, comprising both enzyme deficiencies and red cell membrane protein defects are a heterogeneous group of disorders that present a continuing diagnostic challenge; testing remains time consuming and highly specialized. The diagnostic challenge in red cell enzyme disorders is exemplified by a failure (even in the most experienced laboratories) to establish a diagnosis in more than 3/4 of cases examined. The diagnostic challenge in presumed membrane protein defects is different-most cases can eventually be related to specific mutations, but the procedures involved are highly specialized, costly and time consuming. Throughout the world, there are very few laboratories offering such diagnostic services, and there is a danger that this expertise will be unavailable in the future. In this proposal, we have draw upon the expertise of three laboratories in order to compare new approaches to diagnosis with conventional enzymology and membrane protein analysis. Two novel approaches to diagnosis will be applied to blood samples from patients with hemolytic anemia: 1) comparison of the red cell proteome of patients versus normal controls using 2D difference gel analysis (DIGE); and 2) measurement of damage due to reactive oxygen species in patients samples versus controls. At the beginning of this project, we will use archival clinical samples to validate proteomic methods by analyzing samples with known defects. We will then apply these methods to identify changes in protein expression in samples from newly diagnosed patients sent for evaluation. We will also determine whether increased ROS production or oxidative damage to protein are a common characteristics of hemolytic disorders and if there is any relationship between the level of ROS production/oxidative damage and the severity of hemolysis. All samples will undergo standard enzyme studies in parallel so that we may compare proteomics against current methods for establishing a diagnosis. Because proteomics has the potential to identify novel proteins/genes involved in the pathogenesis of these disorders, in the later years of this study, we expect much of our effort to be devoted to characterization of proteins (and their corresponding genes) that we find expressed at altered levels in patient red cells versus controls. PUBLIC HEALTH RELEVANCE: Hemolytic Anemia: Biochemical, Molecular and Proteomic Diagnostics This application explores new approaches to aid the diagnosis and evaluation of hereditary hemolytic anemia. Known causes of these disorders include mutation in genes encoding several red cell enzymes and red cell structural proteins. Diagnostic approaches are imperfect because often no lesion is found, and current diagnostic methods are both expensive and complicated. We will explore the use of an unbiased proteomic approach to pinpoint proteins that are present in abnormal amounts (new proteins, or loss of expected proteins) in patients without a molecular diagnosis. We will also examine whether oxidative damage is a factor in development of this type of anemia. We are pursuing these studies to try to find the cause of this disorder for the large group of patients for whom we can currently provide no specific diagnosis.

描述（由申请人提供）：溶血性贫血：生物化学、分子和蛋白质组学诊断遗传性溶血性贫血，包括酶缺陷和红细胞膜蛋白缺陷，是一组异质性疾病，存在持续的诊断挑战;检测仍然耗时且高度专业化。红细胞酶疾病的诊断挑战表现为在超过3/4的检查病例中未能建立诊断（即使在最有经验的实验室中）。在假定的膜蛋白缺陷的诊断挑战是不同的，大多数情况下，最终可以与特定的突变，但所涉及的程序是高度专业化的，昂贵和耗时。在全世界，提供这种诊断服务的实验室很少，而且今后可能无法获得这种专门知识。在这项建议中，我们利用三个实验室的专业知识，以比较新的诊断方法与传统的酶学和膜蛋白分析。两种新的诊断方法将应用于溶血性贫血患者的血液样本：1）使用2D差异凝胶分析（DIGE）比较患者与正常对照的红细胞蛋白质组; 2）测量患者样本与对照中活性氧簇造成的损伤。在这个项目的开始，我们将使用存档的临床样本，通过分析已知缺陷的样本来验证蛋白质组学方法。然后，我们将应用这些方法来鉴定来自新诊断患者的样本中蛋白质表达的变化。我们还将确定ROS产生增加或对蛋白质的氧化损伤是否是溶血性疾病的共同特征，以及ROS产生/氧化损伤水平与溶血严重程度之间是否存在任何关系。所有样本将同时进行标准酶研究，以便我们可以将蛋白质组学与当前的诊断方法进行比较。由于蛋白质组学有可能识别参与这些疾病发病机制的新蛋白质/基因，因此在本研究的后期，我们预计我们的大部分努力将致力于表征我们发现在患者红细胞与对照组中表达水平改变的蛋白质（及其相应基因）。公共卫生关系：溶血性贫血：生物化学、分子和蛋白质组学诊断该应用程序探索帮助诊断和评估遗传性溶血性贫血的新方法。这些疾病的已知原因包括编码几种红细胞酶和红细胞结构蛋白的基因突变。诊断方法是不完善的，因为往往没有发现病变，目前的诊断方法既昂贵又复杂。我们将探索使用一种无偏见的蛋白质组学方法来精确定位蛋白质，这些蛋白质在没有分子诊断的患者中以异常的数量存在（新的蛋白质或预期蛋白质的丢失）。我们还将研究氧化损伤是否是这种类型贫血发展的一个因素。我们正在进行这些研究，试图为我们目前无法提供具体诊断的大量患者找到这种疾病的原因。

项目成果

Constitutive NADPH oxidase 4 activity resides in the composition of the B-loop and the penultimate C terminus.

组成型 NADPH 氧化酶 4 活性存在于 B 环和倒数第二个 C 末端的组成中。

• DOI: 10.1074/jbc.m111.332494
• 发表时间: 2012
• 期刊: The Journal of biological chemistry
• 作者: vonLöhneysen,Katharina;Noack,Deborah;Hayes,Patti;Friedman,JeffreyS;Knaus,UllaG
• 通讯作者: Knaus,UllaG

Assessment of the red cell proteome of young patients with unexplained hemolytic anemia by two-dimensional differential in-gel electrophoresis (DIGE).

通过二维微分凝胶内电泳 (DIGE) 评估患有不明原因溶血性贫血的年轻患者的红细胞蛋白质组。

• DOI: 10.1371/journal.pone.0034237
• 发表时间: 2012
• 期刊: PloS one
• 影响因子: 3.7
• 作者: vonLohneysen,Katharina;Scott,ThomasM;Soldau,Katrin;Xu,Xiuling;Friedman,JeffreyS
• 通讯作者: Friedman,JeffreyS