An Interdisciplinary program for systems genomics of complex behaviors
An Interdisciplinary program for systems genomics of complex behaviors
批准号:
8231108
负责人:
Fernando Pardo-Manuel de Villena
金额:
$86.7万
依托单位国家:
美国
项目类别:
财政年份:
2009
资助国家:
美国
项目状态:
已结题
起止时间:
2009-09-30 至 2014-08-31
关键词:
Adverse reactionsAllelesAntipsychotic AgentsAnxietyBehaviorBiologicalBiologyBiomedical ResearchBreedingChromosome MappingClozapineCommitCommunitiesComplementComplexComputational BiologyCopy Number PolymorphismDataData CollectionData SetDatabasesDevelopmentDisciplineDiseaseEtiologyGene Expression ProfileGeneticGenomeGenomicsGenotypeGoalsHaloperidolHealthHumanHuman GeneticsImageryInstitutionInstructionJointsKnowledgeMental DepressionMental disordersMeta-AnalysisModelingMorbidity - disease rateMouse StrainsMusParentsPharmacogeneticsPhenotypePreparationProbabilityProductionPsychiatryRecording of previous eventsRegulationResearchResourcesScienceScientistSocial BehaviorSystemSystems BiologyTestingWorkX Inactivationcomputerized data processingcostdata managementgenome wide association studyhigh riskimprintmetabolomicsmodel developmentmortalitynovelphenomepredictive modelingprogramssuccesstool
中文摘要
描述(由申请人提供):在本申请中,我们提出了一个雄心勃勃但实际可实现的目标:将UNC-CH现有的专业知识整合到一个卓越中心,以开发资源并展示小鼠协作交叉(CC)的实用性,以描述从精神病学中提取的复杂表型的遗传和环境决定因素,这是所有生物医学中最棘手的一组问题。我们提出了一个特别具有挑战性的成功定义——我们将确定高概率的病原学模型(这实际上可能很复杂),然后通过培育具有非常低或非常高表型风险的新型小鼠来证明这些模型的预测能力。一旦得到验证,这些高置信度模型就可以在随后的人体研究中进行测试。在北卡罗来纳大学中心收集的数据将成为更广泛的科学界的宝贵资源,并可用于询问任何数量的生物学问题。开发复杂的、用户交互的数据库来访问收集到的大型、复杂的数据集,是该项目的一个关键组成部分。要实现这一总体目标,需要多种多样的科学专业知识——精神病学、人类遗传学、小鼠表型学、小鼠遗传学、统计遗传学、计算生物学和系统生物学。所有这些学科的专家都深入参与了这项申请的准备工作,并致力于这里所描述的项目。此外,这些不同领域的成功整合是非平凡的;然而,我们可以证明,这个应用程序上的所有科学家在过去五年中都有广泛的互动历史,现在知道如何一起工作,并对同事的专业知识有一个工作知识。北卡罗来纳大学教堂山分校一直致力于促进跨学科基因组学研究,是美国最具学院性的生物医学研究机构之一,为这里提出的“科学2.0”项目提供了肥沃的背景。精神疾病是一个悖论——相关的发病率、死亡率和社会成本都是巨大的,然而,尽管经过了一个多世纪的科学研究,关于核心疾病的病因却几乎没有确凿的事实。虽然GWAS的荟萃分析正在进行中,但早期的结果表明,强有力的和可复制的发现是难以捉摸的。我们的建议提供了另一种模型方法来补充基本精神病学表型的研究。
英文摘要
DESCRIPTION (provided by applicant): In this application, we propose a highly ambitious yet realistically attainable goal: to align existing expertise at UNC-CH into a center of excellence in order to develop as a resource and demonstrate the utility of the murine Collaborative Cross (CC) to delineate genetic and environmental determinants of complex phenotypes drawn from psychiatry, the most intractable set of problems in all of biomedicine. We propose a particularly challenging definition of success - we will identify high probability etiological models (which can be realistically complex) and then prove the predictive capacity of these models by generating novel strains of mice bred to be at either very low or very high risk of the phenotype. Once validated, these high confidence models can then be tested in subsequent human studies. The data collected at the UNC center would be a valuable resource to the wider scientific community and could be used to interrogate any number of biological problems. The development of sophisticated, user-interactive databases to access the large, complex datasets collected represents a key component of the project. Accomplishing this overarching goal requires an exceptional diversity of scientific expertise - psychiatry, human genetics, mouse phenotyping, mouse genetics, statistical genetics, computational biology, and systems biology. Experts in all of these disciplines were deeply involved in the preparation of this application and are committed to the projects described here. Moreover, successful integration of these diverse fields is non-trivial; however, we can document that all scientists on this application have a history of extensive interactions over the past five years, know now how to work together and have a working knowledge of their colleagues' expertise. UNC-Chapel Hill has a shown an intense commitment to promoting inter-disciplinary genomics research and is one of the most collegial biomedical research institutions in the US which provides a fertile backdrop for "Science 2.0" projects such as that proposed here. PUBLIC HEALTH RELEVANCE Psychiatric disorders are a paradox-the associated morbidity, mortality, and societal costs are enormous and yet, despite over a century of scientific study, there are few hard facts about the etiology of the core diseases. Although GWAS meta-analyses are in progress, early results suggest that strong and replicable findings are elusive. Our proposal provides an alternative model approach to complement the study of fundamental psychiatric phenotypes.
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