(1 of 2) Genetic Epidemiology of COPD

(1 of 2) COPD 的遗传流行病学

• 批准号: 8371837
• 负责人: James D Crapo
• 金额: $ 540.11万
• 依托单位: NATIONAL JEWISH HEALTH
• 依托单位国家: 美国
• 财政年份: 2007
• 资助国家: 美国
• 起止时间: 2007-07-01 至 2017-07-31
• 项目状态: 已结题
• 来源: https://reporter.nih.gov/project-details/8371837
• 关键词: Address; Affect; African American; Biochemical; Biological Markers; Candidate Disease Gene; Cause of Death; Characteristics; Chest; Chronic Obstructive Airway Disease; Classification; Clinical; Clinical assessments; DNA Resequencing; DNA Sequence; Data; Development; Diagnostic; Disease; Disease Progression; Disease susceptibility; Environmental Exposure; Evaluation; Frequencies; Genes; Genetic; Genetic Determinism; Genome; Genotype; Goals; Heritability; Heterogeneity; Hybrids; Image; Individual; Interview; Lead; Lung; Lung diseases; Natural History; Not Hispanic or Latino; Obstruction; Outcome; Phase; Phenotype; Physiological; Physiology; Predisposition; Proteins; Pulmonary Emphysema; Questionnaires; Research; Research Personnel; Resources; Respiratory physiology; Risk; Smoker; Spirometry; Staging; Structure; Symptoms; Syndrome; System; Testing; United States; Validation; Variant; Visit; Visual; X-Ray Computed Tomography; base; caucasian American; clinical phenotype; cohort; disease classification; disorder subtype; exome; follow-up; genetic analysis; genetic epidemiology; genetic variant; genome sequencing; genome wide association study; high risk; improved; insight; mortality; novel; prognostic; programs; respiratory

DESCRIPTION (provided by applicant): PROJECT SUMMARY / ABSTRACT Chronic obstructive pulmonary disease (COPD), the third leading cause of death in the United States, is a heterogeneous syndrome. Comprehensive insight into COPD heterogeneity will require longitudinal data to elucidate the genetic, clinical, and radiographic determinants of disease progression. This proposal will extend the COPDGene Study by performing five-year longitudinal follow-up visits on all available COPDGene subjects, with follow-up chest CT scans on all subjects except control smokers with normal baseline CT scans. The primary goals of COPDGene are: a) To identify new genetic loci that influence the development of COPD and COPD-related phenotypes; and b) To reclassify COPD into subtypes that can ultimately be used to develop effective subtype-specific therapies. The primary hypothesis for this renewal application is that subtypes of COPD which differ in pathophysiological mechanism and disease progression can be identified by integrating imaging, clinical, and genetic characteristics. The specific aims are: 1) To characterize the determinants of COPD progression over five years using clinical phenotyping and both quantitative and visual analysis of chest CT scans; 2) To assess the rare and common genetic determinants of COPD and COPD- related phenotypes by genotyping with the Exome Chip in 10,171 subjects, followed by whole genome sequencing of 2,000 subjects with specific imaging characteristics and validation of the rare variant associations in the remaining 8,171 COPDGene subjects; and 3) To develop a new classification system based on pathophysiologic subtypes of COPD by integrating genetic, clinical, physiologic, and CT-based phenotypes. This novel COPD classification system will be validated in multiple collaborating COPD cohorts.

描述（由申请人提供）：项目概要/摘要慢性阻塞性肺疾病（COPD）是美国第三大死亡原因，是一种异质性综合征。全面了解COPD异质性需要纵向数据来阐明疾病进展的遗传、临床和影像学决定因素。该提案将通过对所有可用的COPDGene受试者进行五年纵向随访来扩展COPDGene研究，对所有受试者进行随访胸部CT扫描，除了基线CT扫描正常的对照吸烟者。COPD基因的主要目标是：a）确定影响COPD和COPD相关表型发展的新遗传基因座;和B）将COPD重新分类为亚型，最终可用于开发有效的亚型特异性治疗。本次更新申请的主要假设是，可以通过整合影像学、临床和遗传特征来识别病理生理机制和疾病进展不同的COPD亚型。具体目标是：1）使用临床表型和胸部CT扫描的定量和视觉分析来表征五年内COPD进展的决定因素; 2）通过在10，171名受试者中使用外显子组芯片进行基因分型，然后对2名受试者进行全基因组测序，000名具有特定成像特征的受试者，并在其余8，171名COPD基因受试者中验证罕见变异相关性;（3）通过整合遗传、临床、生理和CT表型，建立一个基于COPD病理生理亚型的新分类系统。该新型COPD分类系统将在多个协作COPD队列中进行验证。