MOLECULAR GENETICS OF LUNG TUMOR PROMOTION IN MICE
MOLECULAR GENETICS OF LUNG TUMOR PROMOTION IN MICE
批准号:
8252222
负责人:
Pengyuan Liu
金额:
$30.8万
依托单位国家:
美国
项目类别:
财政年份:
2009
资助国家:
美国
项目状态:
已结题
起止时间:
2009-06-10 至 2014-04-30
关键词:
3-MethylcholanthreneAllelesAnti-Inflammatory AgentsAnti-inflammatoryAsthmaBALB/cByJ MouseBiological MarkersBudesonideButylated HydroxytolueneCandidate Disease GeneCarcinogensChromosome MappingChronicChronic Obstructive Airway DiseaseClinicalCloningCongenic MiceCongenic StrainDNA SequenceDatabasesDevelopmentDisease ProgressionGene-ModifiedGenesGeneticGenetic PolymorphismGenetic Predisposition to DiseaseGenomeGenomicsGoalsHaplotypesHumanInbred Strains MiceIndomethacinInflammationInflammatoryIrritantsLinkLinkage DisequilibriumLocationLungLung AdenocarcinomaLung AdenomaLung InflammationLung NeoplasmsLung diseasesMalignant NeoplasmsMalignant neoplasm of lungMapsMolecular GeneticsMouse StrainsMusPatientsPenetrancePhenotypePlayPneumoniaPredispositionProcessProductionQuantitative Trait LociReportingResistanceRoleStagingStructureSusceptibility GeneTumor Promotionabstractingbasecancer riskcandidate identificationcarcinogenesisepidemiologic datagenetic linkagelung tumorigenesispositional cloning
中文摘要
摘要
英文摘要
ABSTRACT
Genetic linkage studies using various strains of inbred mice have mapped pulmonary
adenoma susceptibility (Pas) and pulmonary adenoma resistance (Par) loci [1,2]. Recently,
quantitative trait locus (QTL) mapping also identified specific loci that regulate genetic
susceptibility to pulmonary inflammation using inbred mouse strains [3]. Interestingly, common
chromosomal locations were found to regulate both pulmonary inflammation and carcinogenesis
suggesting a causal role of pulmonary inflammation in lung tumor susceptibility [3]. We
hypothesize that genetic modifiers of pulmonary inflammation can be identified using F2 linkage
mapping in mice followed by fine mapping strategies. Four specific aims are proposed to
accomplish our goal. In Specific Aim 1, we will conduct genetic linkage mapping of pulmonary
inflammation QTL in mice exposed to the lung irritant, butylated hydroxytoluene (BHT). In
combination with the carcinogen 3-methylcholanthrene (MCA), BHT promotes MCA-induced lung
tumorigenesis. We propose to use the F2 progeny of two strains of mice (BALB/cByJ and
C57BL6/J) with extreme inflammation and inflammation-induced tumor promotion phenotypes. In
Aim 2, we will conduct haplotype and whole-genome linkage disequilibrium analyses to guide
discover new QTLs and guide and inform which loci to target in Aim 3. We have recently
demonstrated the feasibility of association analysis in the fine mapping and identification of
candidate susceptibility genes for lung adenocarcinomas [4]. Aim 3 will fine map the major QTL
related to genetic susceptibility to pulmonary inflammation and tumor promotion by the
production of congenic strains of mice in which the inflammation susceptible allele is substituted
onto the genetic background of the inflammation resistant mice. The QTL will be fine-mapped by
progressively reducing the QTL region through the production of sub-congenic mouse strains to
narrow it to a size of around 0.5-1 cM. Aim 4 will identify the candidate gene(s) by positional
cloning. DNA sequences of the fine mapped region will be obtained through comparison of
completed mouse genomic databases. Candidate genes will be identified based on identified
functional polymorphisms and differences in expression between the two parental strains of mice
at different stages of disease progression. The significance of these studies is that they will
identify candidate pulmonary inflammation susceptibility genes that may also contribute to
genetic susceptibility to lung cancer in humans.
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Sequencing Coordination and Data Analysis Core
-
批准号:10460344
-
项目类别:
-
资助金额:$41.22万
-
财政年份:2020
-
负责人:Pengyuan Liu
-
依托单位:
Sequencing Coordination and Data Analysis Core
-
批准号:10238138
-
项目类别:
-
资助金额:$41.22万
-
财政年份:2020
-
负责人:Pengyuan Liu
-
依托单位:
Sequencing Coordination and Data Analysis Core
-
批准号:10023344
-
项目类别:
-
资助金额:$41.22万
-
财政年份:2020
-
负责人:Pengyuan Liu
-
依托单位:
Sequencing Coordination and Data Analysis Core
-
批准号:10667378
-
项目类别:
-
资助金额:$41.22万
-
财政年份:2020
-
负责人:Pengyuan Liu
-
依托单位:
MOLECULAR GENETICS OF LUNG TUMOR PROMOTION IN MICE
-
批准号:8214644
-
项目类别:
-
资助金额:$30.8万
-
财政年份:2009
-
负责人:Pengyuan Liu
-
依托单位:
Genome-Wide Association Studies of Inherited Predisposition to Lung Cancer
-
批准号:8190687
-
项目类别:
-
资助金额:$35.72万
-
财政年份:2009
-
负责人:Pengyuan Liu
-
依托单位:
MOLECULAR GENETICS OF LUNG TUMOR PROMOTION IN MICE
-
批准号:8182524
-
项目类别:
-
资助金额:$21.04万
-
财政年份:2009
-
负责人:Pengyuan Liu
-
依托单位:
Genome-Wide Association Studies of Inherited Predisposition to Lung Cancer
-
批准号:7736106
-
项目类别:
-
资助金额:$44.27万
-
财政年份:2009
-
负责人:Pengyuan Liu
-
依托单位:
MOLECULAR GENETICS OF LUNG TUMOR PROMOTION IN MICE
-
批准号:7736100
-
项目类别:
-
资助金额:$31.54万
-
财政年份:2009
-
负责人:Pengyuan Liu
-
依托单位:
Genome-Wide Association Studies of Inherited Predisposition to Lung Cancer
-
批准号:8471070
-
项目类别:
-
资助金额:$41.58万
-
财政年份:2009
-
负责人:Pengyuan Liu
-
依托单位:
Genome-Wide Association Studies of Inherited Predisposition to Lung Cancer
-
批准号:8296049
-
项目类别:
-
资助金额:$44.82万
-
财政年份:2009
-
负责人:Pengyuan Liu
-
依托单位:
Genome-Wide Association Studies of Inherited Predisposition to Lung Cancer
-
批准号:8213411
-
项目类别:
-
资助金额:$45.42万
-
财政年份:2009
-
负责人:Pengyuan Liu
-
依托单位:
MOLECULAR GENETICS OF LUNG TUMOR PROMOTION IN MICE
-
批准号:8460090
-
项目类别:
-
资助金额:$28.95万
-
财政年份:2009
-
负责人:Pengyuan Liu
-
依托单位:
海外基金