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MOLECULAR GENETICS OF LUNG TUMOR PROMOTION IN MICE

MOLECULAR GENETICS OF LUNG TUMOR PROMOTION IN MICE
小鼠肺肿瘤促进的分子遗传学
批准号:
7736100
负责人:
Pengyuan Liu
金额:
$31.54万
依托单位:
依托单位国家:
美国
项目类别:
财政年份:
2009
资助国家:
美国
项目状态:
已结题
起止时间:
2009-06-10 至 2014-04-30

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中文摘要
翻译
描述(由申请人提供):使用不同品系的近交系小鼠进行的遗传连锁研究已经定位了肺腺瘤易感性(PAS)和肺腺瘤耐药(PAR)基因座1,2。最近,利用近交系小鼠也发现了调节肺部炎症遗传易感性的特定基因座3。有趣的是,共同的染色体位置被发现调节肺部炎症和癌症的发生,暗示肺部炎症在肺部肿瘤易感性中的因果作用3。我们假设可以使用F2连锁和连锁不平衡(LD)定位在小鼠中识别肺部炎症的遗传修饰因素,然后进行精细的定位策略。为了实现我们的目标,我们提出了四个具体目标。在具体目标1中,我们将对暴露于肺刺激物丁基羟基甲苯(BHT)的小鼠的肺部炎症QTL进行遗传连锁定位。与致癌物3-甲基胆蒽(MCA)相结合,BHT促进了MCA诱导的肺肿瘤的发生。我们建议使用具有极端炎症和炎症诱导肿瘤促进表型的两个品系小鼠(BALB/cByJ和C57BL6/J)的F2后代来定位QTL。在目标2中,我们将进行单倍型和全基因组LD分析,以发现新的QTL,并指导和告知目标3中的哪些基因位点。我们最近证明了关联分析在肺腺癌候选易感基因精细定位和识别中的可行性。4.目标3将通过产生同源小鼠品系来精细定位与肺部炎症和肿瘤易感性相关的主要QTL,其中炎症易感等位基因被替换到炎症抵抗小鼠的遗传背景上。通过生产亚基因小鼠品系,逐步减少QTL区域,将其缩小到0.5-1厘米左右,从而对QTL进行精细定位。目的4通过定位克隆的方法确定候选基因(S)。候选基因将根据已识别的功能多态和两个亲本小鼠在疾病发展的不同阶段之间的基因表达差异来确定。这些研究的意义在于,它们将确定可能也有助于人类肺癌遗传易感性的候选肺部炎症易感基因。公共卫生相关性:越来越多的证据支持炎症和癌症之间的直接联系,特别是肺癌。人类的流行病学数据显示,患有各种肺部炎症性疾病的患者患癌症的风险增加,包括慢性阻塞性肺疾病(COPD)和哮喘等。炎症被发现促进了小鼠肺部肿瘤的发展。许多控制肺部炎症遗传易感性的QTL也与调节小鼠肺肿瘤易感性的QTL共定位。给予布地奈德和吲哚美辛(具有抗炎活性)可抑制小鼠肺肿瘤的发生,包括COX1和COX2在内的炎症生物标志物在小鼠和人肺癌中经常升高。炎症和肺癌之间的这些联系表明,肺部炎症似乎是肺部肿瘤发生过程中一个关键的肿瘤促进步骤。这项建议的目的是确定肺部炎症的遗传修饰物。这些研究的意义在于,它们将确定可能也有助于人类肺癌遗传易感性的候选肺部炎症易感基因。
英文摘要
DESCRIPTION (provided by applicant): Genetic linkage studies using various strains of inbred mice have mapped pulmonary adenoma susceptibility (Pas) and pulmonary adenoma resistance (Par) loci 1,2. Recently, quantitative trait locus (QTL) mapping also identified specific loci that regulate genetic susceptibility to pulmonary inflammation using inbred mouse strains 3. Interestingly, common chromosomal locations were found to regulate both pulmonary inflammation and carcinogenesis suggesting a causal role of pulmonary inflammation in lung tumor susceptibility 3. We hypothesize that genetic modifiers of pulmonary inflammation can be identified using F2 linkage and linkage disequilibrium (LD) mapping in mice followed by fine mapping strategies. Four specific aims are proposed to accomplish our goal. In Specific Aim 1, we will conduct genetic linkage mapping of pulmonary inflammation QTL in mice exposed to the lung irritant, butylated hydroxytoluene (BHT). In combination with the carcinogen 3-methylcholanthrene (MCA), BHT promotes MCA-induced lung tumorigenesis. We propose to use the F2 progeny of two strains of mice (BALB/cByJ and C57BL6/J) with extreme inflammation and inflammation-induced tumor promotion phenotypes to map QTLs. In Aim 2, we will conduct haplotype and whole-genome LD analyses to discover new QTLs and guide and inform which loci to target in Aim 3. We have recently demonstrated the feasibility of association analysis in the fine mapping and identification of candidate susceptibility genes for lung adenocarcinomas 4. Aim 3 will fine map the major QTL related to genetic susceptibility to pulmonary inflammation and tumor promotion by the production of congenic strains of mice in which the inflammation susceptible allele is substituted onto the genetic background of the inflammation resistant mice. The QTL will be fine-mapped by progressively reducing the QTL region through the production of sub-congenic mouse strains to narrow it to a size of around 0.5-1 cM. Aim 4 will identify the candidate gene(s) by positional cloning. Candidate genes will be identified based on identified functional polymorphisms and differences in gene expression between the two parental strains of mice at different stages of disease progression. The significance of these studies is that they will identify candidate pulmonary inflammation susceptibility genes that may also contribute to genetic susceptibility to lung cancer in humans. PUBLIC HEALTH RELEVANCE: Increasing evidence supports a direct link between inflammation and cancer, and lung cancer in particular. Epidemiologic data in humans have shown an increased cancer risk in patients with various inflammatory diseases of the lung, including chronic obstructive pulmonary disease (COPD) and asthma, among others. Inflammation was found to enhance the development of lung tumors in mice. Many of the QTLs that control genetic susceptibility to lung inflammation, also co-localize with QTLs that regulate lung tumor susceptibility in mice. Administration of budesonide and indomethacin (with anti-inflammatory activity) inhibit lung tumorigenesis in mice and inflammation biomarkers including Cox1 and Cox2 are frequently elevated in both mouse and human lung cancers. These associations between inflammation and lung cancer suggest that pulmonary inflammation appears to be a key tumor promotion step during the lung tumorigenesis process. The objective of this proposal is to identify genetic modifiers of pulmonary inflammation. The significance of these studies is that they will identify candidate pulmonary inflammation susceptibility genes that may also contribute to genetic susceptibility to lung cancer in humans.
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Sequencing Coordination and Data Analysis Core
  • 批准号:
    10460344
  • 项目类别:
  • 资助金额:
    $41.22万
  • 财政年份:
    2020
  • 负责人:
    Pengyuan Liu
  • 依托单位:
Sequencing Coordination and Data Analysis Core
  • 批准号:
    10238138
  • 项目类别:
  • 资助金额:
    $41.22万
  • 财政年份:
    2020
  • 负责人:
    Pengyuan Liu
  • 依托单位:
Sequencing Coordination and Data Analysis Core
  • 批准号:
    10023344
  • 项目类别:
  • 资助金额:
    $41.22万
  • 财政年份:
    2020
  • 负责人:
    Pengyuan Liu
  • 依托单位:
Sequencing Coordination and Data Analysis Core
  • 批准号:
    10667378
  • 项目类别:
  • 资助金额:
    $41.22万
  • 财政年份:
    2020
  • 负责人:
    Pengyuan Liu
  • 依托单位:
海外基金