Role of nucleolin in regulating mRNA stability during DNA damage response (DDR)

核仁素在 DNA 损伤反应 (DDR) 过程中调节 mRNA 稳定性中的作用

• 批准号: 8491082
• 负责人: FRIDA E KLEIMAN
• 金额: $ 16.86万
• 依托单位: BROOKLYN COLLEGE
• 依托单位国家: 美国
• 财政年份: 2013
• 资助国家: 美国
• 起止时间: 2013-04-01 至 2015-03-31
• 项目状态: 已结题
• 来源: https://reporter.nih.gov/project-details/8491082
• 关键词: 3' Untranslated Regions; Affect; Aging; Apoptosis; Apoptotic; BARD1 gene; BCL2 gene; Binding; Biological Assay; Biomedical Research; CDKN2A gene; Cell Death; Cell Proliferation; Cell Survival; Cells; Cessation of life; Complex; DNA Damage; DNA Repair; DNA Repair Pathway; Data; Development; Elements; Faculty; Funding; Gene Expression; Gene Expression Regulation; Gene Targeting; Genes; Grant; Health; Immunoprecipitation; Knowledge; Malignant Neoplasms; Mammalian Cell; Measures; Mediating; Messenger RNA; Minority; Minority-Serving Institution; Molecular; Mutation; Pathway interactions; Phosphoproteins; Phosphorylation; Physiological; Play; Poly(A) Tail; Poly(A)-specific ribonuclease; Polyadenylation; Process; Property; Protein p53; Proteins; RNA; RNA Binding; Regulation; Research; Research Support; Role; Scientist; Signal Transduction; Spectrophotometry; Testing; Therapeutic; Tumor Suppressor Proteins; Variant; Woman; Work; anticancer research; base; educationally disadvantaged; graduate student; inhibitor/antagonist; insight; mRNA Decay; mRNA Stability; nucleolin; outreach; p53 Signaling Pathway; public health relevance; response; small molecule; undergraduate student

DESCRIPTION (provided by applicant): Nucleolin, an abundant nucleolar phosphoprotein with RNA- and p53-binding properties, controls gene expression by regulating mRNA stability and the p53 signaling pathway. This proposal is aimed to study the basic molecular mechanism of nucleolin-mediated regulation of mRNA stability during the DNA damage response (DDR) and its physiological relevance in cell survival or cell death. The specific hypothesis is that nucleoln interacts with mRNA 3' processing factors and regulates the mRNA stability of genes involved in either the DNA repair or apoptotic response upon DNA damage. Our preliminary data indicate that nucleolin associates with PARN deadenylase and p53, both of which play a role in the regulation of mRNA 3' processing of many genes during DDR, and nucleolin phosphorylation state regulates PARN activity. In Specific Aim 1, we will elucidate the functional interaction of nucleolin with mRNA 3' processing factors and their effect on the mRNA stability during DDR. We will use mass-spectrophotometry analyses to identify proteins that differentially associate with nucleolin phospho-variants. In Specific Aim 2, we will characterize nucleolin/PARN mRNA targets in the p53-mediated DDR upon UV treatment. We will measure the steady state levels of the target- mRNAs in the p53-signaling pathway, analyze direct RNA-binding to the nucleolin/PARN complex and assess the functional consequences of these interactions in apoptotic or cell- viability assays. The effect of nucleolin/PARN interaction on other potential targets in different pathways will be assessed by commercially available PCR arrays. This study is aimed at understanding how nucleolin/PARN/p53 interaction regulate mRNA stability and hence the expression of genes involved in the p53 signaling, apoptosis and DNA repair pathways during cellular response to DNA damage. Elucidating the functional consequences of these interactions in cell survival or death pathways upon DNA damage will advance the field of nucleolin-based small molecule inhibitors, offering new alternatives for therapeutics. This grant will provide research support to two women scientists at CUNY minority-serving institutions (one junior and the other minority faculty) to pursue basic molecular cancer research. This funding will also help to outreach socially and educationally disadvantaged CUNY undergraduate and graduate students, and expose them to health-related research.

描述（由申请人提供）：核仁素是一种丰富的核仁磷蛋白，具有RNA和p53结合特性，通过调节mRNA稳定性和p53信号通路控制基因表达。本研究旨在研究DNA损伤反应（DDR）过程中核仁素介导的mRNA稳定性调节的基本分子机制及其在细胞存活或细胞死亡中的生理相关性。具体的假设是，核仁形成区与mRNA 3'加工因子相互作用，并调节DNA损伤后参与DNA修复或凋亡反应的基因的mRNA稳定性。我们的初步数据表明，核仁素与PARN去腺苷酶和p53，这两个都发挥了作用，在DDR过程中的许多基因的mRNA 3'加工的调节，核仁素磷酸化状态调节PARN活性。在具体目标1中，我们将阐明核仁素与mRNA 3'加工因子的功能相互作用及其对DDR过程中mRNA稳定性的影响。我们将使用质谱分析，以确定差异与核仁素磷酸化变体相关的蛋白质。在特定目标2中，我们将表征UV处理后p53介导的DDR中的核仁素/PARN mRNA靶点。我们将测量p53信号通路中靶mRNA的稳态水平，分析与核仁素/PARN复合物的直接RNA结合，并评估这些相互作用在凋亡或细胞活力测定中的功能后果。将通过市售PCR阵列评估核仁素/PARN相互作用对不同途径中其他潜在靶标的影响。本研究的目的是了解核仁素/PARN/p53相互作用如何调节mRNA的稳定性，从而参与p53信号转导，细胞凋亡和DNA修复途径的基因的表达在细胞对DNA损伤的反应。阐明DNA损伤后细胞存活或死亡途径中这些相互作用的功能后果将推进基于核仁素的小分子抑制剂领域，为治疗提供新的替代方案。这笔赠款将为纽约市立大学少数民族服务机构的两名女科学家（一名大三学生和另一名少数民族教师）提供研究支持，以进行基本的分子癌症研究。这笔资金还将帮助在社会和教育方面处于不利地位的纽约市立大学本科生和研究生，使他们接触与健康有关的研究。