Discovery and Characterization of Quantitative Trait Nucleotides
Discovery and Characterization of Quantitative Trait Nucleotides
批准号:
8507755
负责人:
Matthew Rockman
金额:
$28.87万
依托单位:
依托单位国家:
美国
项目类别:
财政年份:
2009
资助国家:
美国
项目状态:
已结题
起止时间:
2009-09-30 至 2015-07-31
关键词:
AffectAgricultureAllelesAnecdotesArchitectureBehavioralBiologyC. elegans genomeCaenorhabditis elegansCatalogingCatalogsCollectionComplexComplex Genetic TraitComplex MixturesDataDevelopmentDiseaseDissectionEnvironmentFrequenciesGene FrequencyGenesGeneticGenetic EpistasisGenetic PolymorphismGenetic RecombinationGenetic VariationGenomeGenomicsGenotypeGoalsHealthHeritabilityHumanInbreedingIndividualKnowledgeLearningLeftMapsMeasuresMethodsModelingMolecularMutationNematodaNucleotide MappingNucleotidesOrganismPhenotypePhysiologyPopulationPopulation DistributionsPopulation GeneticsPredispositionQuantitative Trait LociReadingRecombinantsReporterResearchResolutionResourcesShapesSorting - Cell MovementSpecificityStagingTissuesTranscriptTransgenic OrganismsVariantX Chromosomeabstractingbasedesigndisorder riskgenetic variantgenome wide association studygenome-widehuman diseasepleiotropismsuccesstherapy developmenttooltrait
中文摘要
(4.4.6)项目摘要/摘要
英文摘要
(4.4.6) PROJECT SUMMARY/ABSTRACT
Heritable variation underlies variation in human health, and the molecular basis for that variation is
largely uncharacterized. Recent results suggest that heritable variation in human disease risk may be
shaped by a complex mixture of rare alleles, common alleles of small effect, and alleles of all
frequencies whose effects depend on allelic states at other loci. Such complexity is expected for
quantitative traits under stabilizing selection, such as human physiology, and the complex architecture
of such traits is a major obstacle to their genetic dissection. Knowledge of the genetic variants
underlying complex traits is central to methods for ameliorating or predicting disease risk and for
developing therapies for treatment. Transcript abundance traits in the nematode C. elegans are a
promising model for variation in complex traits under stabilizing selection. These traits are amenable
to full genetic dissection using panel of near-isogenic inbred lines of that vary within a small interval of
the X chromosome implicated in heritable variation in hundreds of transcript abundance traits.
Creation and study of such a permanent mapping resource will permit identification of the causal
variants underlying variation in transcript abundances at the resolution of individual sequence
variants, generating a catalog of quantitative trait nucleotides. Such a catalog will reveal the types of
mutations that contribute to variation in complex traits, their modes of action, their additive and
interactive effect sizes, their frequencies in natural populations, and the distribution of their effects
across tissues and developmental stages and environments. Quantitative trait nucleotides mapped to
single-variant resolution have never been collected for any multicellular organism, and their features
will inform efforts to discover the genetic basis of complex disease traits in humans.
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DOI:
10.1038/nrg3688
发表时间:
2014-04
期刊:
Nature reviews. Genetics
影响因子:
--
作者:
[Paaby AB, Rockman MV]
通讯作者:
Rockman MV
DOI:
10.1534/g3.113.008649
发表时间:
2014-02-19
期刊:
G3 (Bethesda, Md.)
影响因子:
--
作者:
[Glater EE, Rockman MV, Bargmann CI]
通讯作者:
Bargmann CI
DOI:
10.1111/j.1558-5646.2011.01486.x
发表时间:
2012-01
期刊:
Evolution; international journal of organic evolution
影响因子:
--
作者:
[Rockman MV]
通讯作者:
Rockman MV
DOI:
10.1534/g3.113.005785
发表时间:
2013-06-21
期刊:
G3 (Bethesda, Md.)
影响因子:
--
作者:
[Pollard DA, Rockman MV]
通讯作者:
Rockman MV
DOI:
10.1016/j.cub.2015.09.019
发表时间:
2015-10-19
期刊:
Current biology : CB
影响因子:
--
作者:
[Noble LM, Chang AS, McNelis D, Kramer M, Yen M, Nicodemus JP, Riccardi DD, Ammerman P, Phillips M, Islam T, Rockman MV]
通讯作者:
Rockman MV
EDGE CMT: deleterious recessive variation - from experimental data to predictive models
-
批准号:10675239
-
项目类别:
-
资助金额:$38.09万
-
财政年份:2023
-
负责人:Matthew Rockman
-
依托单位:
Evolutionary Genetics of Animal Development
-
批准号:10206749
-
项目类别:
-
资助金额:$37.39万
-
财政年份:2021
-
负责人:Matthew Rockman
-
依托单位:
Evolutionary Genetics of Animal Development
-
批准号:10371140
-
项目类别:
-
资助金额:$37.02万
-
财政年份:2021
-
负责人:Matthew Rockman
-
依托单位:
Evolutionary Genetics of Animal Development
-
批准号:10594396
-
项目类别:
-
资助金额:$37.95万
-
财政年份:2021
-
负责人:Matthew Rockman
-
依托单位:
Mechanisms of radiation tolerance in Caenorhabditis from Chernobyl
-
批准号:10162588
-
项目类别:
-
资助金额:$19.81万
-
财政年份:2020
-
负责人:Matthew Rockman
-
依托单位:
Genetic analysis of segregating recessive variation
-
批准号:9218968
-
项目类别:
-
资助金额:$30.67万
-
财政年份:2017
-
负责人:Matthew Rockman
-
依托单位:
Genetic analysis of segregating recessive variation
-
批准号:9679797
-
项目类别:
-
资助金额:$3.55万
-
财政年份:2017
-
负责人:Matthew Rockman
-
依托单位:
Discovery and Characterization of Quantitative Trait Nucleotides
-
批准号:8119653
-
项目类别:
-
资助金额:$29.81万
-
财政年份:2009
-
负责人:Matthew Rockman
-
依托单位:
Discovery and Characterization of Quantitative Trait Nucleotides
-
批准号:8306930
-
项目类别:
-
资助金额:$29.91万
-
财政年份:2009
-
负责人:Matthew Rockman
-
依托单位:
Discovery and Characterization of Quantitative Trait Nucleotides
-
批准号:7937997
-
项目类别:
-
资助金额:$30.36万
-
财政年份:2009
-
负责人:Matthew Rockman
-
依托单位:
海外基金