"Gene Trafficking on an Evolving X Chromosome in Drosophila"
"Gene Trafficking on an Evolving X Chromosome in Drosophila"
批准号:
8436307
负责人:
Doris Bachtrog
金额:
$28.19万
依托单位国家:
美国
项目类别:
财政年份:
2010
资助国家:
美国
项目状态:
已结题
起止时间:
2010-03-01 至 2014-02-28
关键词:
Alternative SplicingComputer AnalysisDataDefectDosage Compensation (Genetics)Drosophila genusEvolutionFertilityGene DuplicationGene ExpressionGene Expression ProfileGenesGeneticGenetic PolymorphismGenomeGenomicsHeadHumanLarvaLocationMale InfertilityModelingMolecularMolecular ProfilingMovementOvaryPatternPopulationPopulation GeneticsPropertyRelative (related person)Sex BiasSex ChromosomesSystemTestingTestisTissuesX ChromosomeX InactivationY Chromosomeautosomebasecomparativecomparative genomicsdeep sequencingdriving forceduplicate genesflyfunctional genomicsgenome analysisgenome sequencinggenome-wideimprovedmalenovelpressureresponsesample fixationsextraffickingtranscriptome sequencingtranscriptomics
中文摘要
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英文摘要
Genes are distributed non-randomly across the genome. One intriguing pattern to emerge from genome-wide expression profiling is that genes with sex-biased expression that is, genes that are differentially expressed between the sexes show a biased distribution on sex chromosomes. In particular, male-biased genes are depleted from the Drosophila X chromosome, such that the X has become demasculinized. The deficiency of male-biased genes can partly be explained by movement of male genes off the X chromosome. The evolutionary forces underlying these patterns are controversial and may involve male germline X inactivation, sexual antagonism, or dosage compensation mechanisms. Drosophila miranda - a species for which we recently generated a de novo genome sequence assembly - has a newly formed sex chromosome system. Its neo-Y chromosome is in transition from an ordinary autosome to a degenerate Y. In response, the neo-X is evolving the stereotypical properties of a differentiated X, including the acquisition of partial dosage compensation and - as suggested by preliminary data - an excess of gene translocations originating from its neo-X. D. Miranda therefore provides a unique system to study the mechanisms of gene trafficking on an evolving X chromosome and its evolutionary causes in action using a comparative and functional genomics approach.
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海外基金