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中文摘要
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描述(由申请人提供):该提案将扩大和利用NIA的投资,作为NIH神经科学研究蓝图的一部分,在神经科学信息框架(NIF; http://neuinfo.org)中创建衰老综合平台试点。NIF是一个独特的资源,其中各种生物医学数据(即行为,临床,遗传,成像等),并且资源通过语义搜索和知识环境同时可用。目前的NIF数据联合会在110多个数据库中搜索超过3.5亿条数据记录,通过使用策展协助工具每周调整和添加新的数据库。NIF在理解通过应用统一的策展标准和与我们的本体的链接来最大化不同数据价值的要求方面获得了丰富的经验。通过对NIF的投资,NIA拥有一个具有成本效益的平台,拥有一个经验丰富的策展团队,为其资产和老化相关资产提供数据提取和数据存档平台。这直接涉及外地住房储备金的目的之一,即“数据集的存档和传播,以便能够进行二级分析,进一步推动研究”。目前的NIF提供了一个面向神经科学的发现门户网站;然而,它的底层系统是通用的,可以很容易地进行调整,为不同的社区提供专门的视图。根据这一建议,我们将加速整合NIA相关数据资源,并以此为驱动力,提供专门针对老龄化的搜索门户和知识环境。纳入这一试点的数据集将可作为整个NIF系统的一部分,通过网络服务、链接的开放数据和将数据与文献链接的服务提供,而无需额外工作,因为NIF已经将这些服务添加到每个联合数据集。一旦纳入国家信息框架,这些资源就会为更广泛的研究人员所了解和使用。 公共卫生相关性:这种应用程序直接解决了迫切需要的发展有效的能力,整合和计算生物医学,社会行为和临床数据,通过提供知识环境,提供必要的基础设施,充分利用现有的数据集。该提案侧重于数据集的存档和传播,以实现二次分析,从而进一步推进研究,并满足NIH无缝交换资源以促进知识发现的目标。
英文摘要
DESCRIPTION (provided by applicant): This proposal will expand and leverage NIA's investment, as part of NIH's Blueprint for Neuroscience Research, in the Neuroscience Information Framework (NIF; http://neuinfo.org) to create an Aging Integrative Platform Pilot. NIF is a unique resource where diverse biomedical data (i.e. behavioral, clinical, genetic, imaging, etc.), and resources are concurrently available through a semantic search and knowledge environment. The current NIF data federation searches over 350 million data records, in over 110 databases, with new databases being aligned and added weekly through the use of curation assistance tools. NIF has gained extensive experience in understanding the requirements to maximize the value of diverse data through the application of uniform curation standards and links to our ontologies. Through its investment in NIF, NIA has a cost-effective platform available with an experienced curation team to provide a data extraction and data archiving platform for its assets and aging related assets in general. This directly addresses one of the purposes of the RFA, namely the "archiving and dissemination of data sets to enable secondary analyses in order to further advance research". The current NIF provides a discovery portal geared towards neuroscience; however, its underlying system is generic and can be easily adapted to provide specialized views for different communities. Under this proposal, we will accelerate the integration of NIA-relevant data resources and use these as the driver to provide a search portal and knowledge environment that is specifically geared towards aging. The data sets assimilated into this pilot will be usable as part of the overall NIF system, available through web services, linked open data and services to link data to the literature, without additional work as NIF already adds these services to each federated data set. Once integrated within the NIF, these resources become known and usable to a much wider array of researchers. PUBLIC HEALTH RELEVANCE: This application directly addresses the urgent need for the development of efficient capabilities for integration of and computation on biomedical, sociobehavioral and clinical data by providing a knowledge environment which provides the necessary infrastructure to take full advantage of existing datasets. This proposal focuses on the archiving and dissemination of data sets to enable secondary analyses thereby further advancing research and meeting NIH's goal of seamless exchange of resources to promote knowledge discovery.
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SPARC Engagement Plan with the Common Fund Data Ecosystem
SPARC Engagement Plan with the Common Fund Data Ecosystem
SPARC Engagement Plan with the Common Fund Data Ecosystem
K-CORE: Curation and Knowledge Management for SPARC
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