The Metabolomics Data Center and Workbench (MDCW)

代谢组学数据中心和工作台 (MDCW)

• 批准号: 8828921
• 负责人: Shankar Subramaniam
• 金额: $ 44.15万
• 依托单位: UNIVERSITY OF CALIFORNIA, SAN DIEGO
• 依托单位国家: 美国
• 财政年份: 2012
• 资助国家: 美国
• 起止时间: 2012-09-06 至 2017-08-31
• 项目状态: 已结题
• 来源: https://reporter.nih.gov/project-details/8828921
• 关键词: Address; Architecture; Biology; Biomedical Research; Cloud Computing; Collaborations; Communities; Community Developments; Companions; Country; Data; Databases; Development; Education; Educational workshop; Environment; Funding; Glues; Grant; Head; Health Insurance Portability and Accountability Act; Imagery; Informatics; Institution; International; Japanese Population; Laboratories; Learning; Learning Module; Letters; Link; Lipids; Maintenance; Mass Spectrum Analysis; Memory; Metabolic; Metadata; Modeling; Netherlands; Online Systems; Ontology; Outcome; Pathway interactions; Performance; Phase; Principal Investigator; Production; Protocols documentation; PubChem; Research; Research Design; Research Infrastructure; Research Personnel; Resources; Science; Services; Structure; Teleconferences; Testing; Training; United States National Institutes of Health; Universities; Work; computer infrastructure; data format; design; experience; functional genomics; interoperability; metabolomics; next generation; outreach; pathway tools; relational database; repository; small molecule; success; supercomputer; tool

DESCRIPTION (provided by applicant): The objective of this proposal, Metabolomics Data Center and Workbench (MDCW), is the creation of a scalable and extensible informatics infrastructure which will serve as a national metabolomics resource. This is a companion proposal to RCMRCs and is a part of the Common Fund Initiative in metabolomics. The proposed MDCW will coordinate data activities of national and international metabolomics centers and initiatives, serve as a national data repository and develop a Workbench that will have data, query and analysis interfaces, and tools for interactive analysis and integration of metabolomics data. The proposed work will build on the extant infrastructure for lipids developed by the PI's laboratory as a part of the NIH Glue Grant initiative on Lipidomics. The specific objectives of this proposal are, a) development of a metabolomics data repository, tools and interfaces, b) develop a cloud computing infrastructure for metabolomics, c) coordinate RCMRCs and other metabolomics initiatives and d) provide the resources for advancing metabolomics education and research to enable new biomedicine.

描述（由申请人提供）：该提案的目标，代谢组学数据中心和数据中心（MDCW），是创建一个可扩展的和可扩展的信息学基础设施，将作为国家代谢组学资源。这是RCMRC的配套提案，也是代谢组学共同基金倡议的一部分。拟议的MDCW将协调国家和国际代谢组学中心和倡议的数据活动，作为国家数据库，并开发一个具有数据、查询和分析界面的数据库，以及用于代谢组学数据交互式分析和整合的工具。拟议的工作将建立在PI实验室开发的脂质现有基础设施上，作为NIH Glue Grant Lipidomics计划的一部分。该提案的具体目标是：a）开发代谢组学数据库、工具和界面; B）开发代谢组学云计算基础设施; c）协调RCMRC和其他代谢组学倡议; d）提供资源，推进代谢组学教育和研究，以实现新的生物医学。