Analysis of RORA and other candidate genes in PTSD

RORA及其他PTSD候选基因分析

• 批准号: 8680008
• 负责人: MARK W MILLER
• 金额: --
• 依托单位: VA BOSTON HEALTH CARE SYSTEM
• 依托单位国家: 美国
• 财政年份: 2013
• 资助国家: 美国
• 起止时间: 2013-01-01 至 2015-12-31
• 项目状态: 已结题
• 来源: https://reporter.nih.gov/project-details/8680008
• 关键词: Accidents; Address; Affect; American Psychiatric Association; Attention deficit hyperactivity disorder; Autistic Disorder; Behavioral; Binding; Biochemical; Bioinformatics; Bipolar Disorder; Blood; Candidate Disease Gene; Circadian Rhythms; Cognitive; Collection; Comorbidity; Complement; DNA Sequence; DSM-IV; Data; Development; Diagnosis; Disasters; Disease; Emotional; Emotions; Event; Exposure to; Forcible intercourse; Fright; Gene Expression Profile; Gene Expression Profiling; General Population; Genes; Genetic; Genetic Variation; Genotype; Heredity; Heritability; Individual; Injury; Life; Light; Lymphocyte; Mental Depression; Mental disorders; Military Personnel; Molecular; Molecular Genetics; NR1 gene; Nightmare; Nuclear Hormone Receptors; Orphan; Paper; Pathway interactions; Phenotype; Physiological; Play; Post-Traumatic Stress Disorders; Probability; Process; Proteins; Psychophysiology; Publishing; RNA; Reporting; Research; Retinoids; Risk Factors; Role; Single Nucleotide Polymorphism; Sleep; Stimulus; Stress; Symptoms; Thinking; Trauma; Twin Multiple Birth; Twin Studies; Variant; Veterans; Violence; base; brain cell; combat; disorder risk; experience; follow-up; functional genomics; gene interaction; genetic analysis; genetic risk factor; genetic variant; genome wide association study; genome-wide; hormone regulation; hormone response element; meetings; member; neuroprotection; novel; physical assault; public health relevance; receptor; response; risk variant; sexual assault

DESCRIPTION (provided by applicant): Posttraumatic Stress Disorder (PTSD) is a psychiatric disorder characterized by profound disturbances in cognitive, behavioral and physiological functioning that occurs following exposure to a psychologically traumatic event. After exposure, the probability of developing PTSD is estimated to be approximately 10% in the general population, although higher rates (i.e., closer to 25%) have been observed among combat Veterans. Numerous factors contribute to the probability of developing the disorder including heredity. Twin studies have shown that a 30-70% of variation in PTSD risk is explained by genetic factors. In a recent paper (Logue et al, 2012); we reported results from the first published genome-wide association study (GWAS) for PTSD. We found that single nucleotide polymorphisms (SNPs) in the retinoid-related orphan receptor alpha (RORA) gene showed genome-wide significant associations with PTSD suggesting that this gene is an important risk locus for the disorder. RORA has been implicated in prior psychiatric GWAS as a risk factor for attention-deficit hyperactivity disorder, bipolar disorder, autism, and depression. The gene is also known to influence circadian rhythms, hormone regulation, and neuroprotection. Based on this, we believe that our finding implicating RORA in the development PTSD may point to a new and potentially important avenue for future research on the disorder. Therefore, the aim of the proposal is to conduct a more detailed genetic analysis of RORA and PTSD. Specifically, we propose to conduct extensive sequencing of RORA (along with several other PTSD candidate genes) to identify the complete array of genetic variation in these genes associated with PTSD risk and then perform genome- wide expression analysis using blood lymphocyte RNA. We also aim to follow-up our GWAS finding with analysis of additional PTSD-related comorbidity phenotypes and examination of possible gene-gene interactions. Findings are expected to shed new light on the role of RORA and other candidate genes on the development of PTSD.

描述（由申请人提供）： 创伤后应激障碍（PTSD）是一种精神障碍，其特征是在暴露于心理创伤事件后发生的认知、行为和生理功能的严重障碍。暴露后，在一般人群中发生PTSD的概率估计约为10%，尽管发生率较高（即，近25%），在战斗退伍军人中观察到。许多因素导致了包括遗传在内的疾病的发生。双胞胎研究表明，PTSD风险的30-70%的变化是由遗传因素解释的。在最近的一篇论文（Logue et al，2012）中，我们报告了第一个发表的PTSD全基因组关联研究（GWAS）的结果。我们发现维甲酸相关孤儿受体α（RORA）基因的单核苷酸多态性（SNP）与PTSD在全基因组范围内存在显著相关性，表明该基因是该疾病的重要风险位点。RORA与先前的精神病GWAS有关，是注意力缺陷多动障碍、双相情感障碍、自闭症和抑郁症的危险因素。该基因也被认为影响昼夜节律，激素调节和神经保护。基于此，我们相信，我们的发现暗示RORA在PTSD的发展可能指向一个新的和潜在的重要途径，为未来的研究障碍。因此，该提案的目的是对RORA和PTSD进行更详细的基因分析。具体而言，我们建议对RORA（沿着几个其他PTSD候选基因）进行广泛测序，以鉴定这些基因中与PTSD风险相关的完整遗传变异阵列，然后使用血液淋巴细胞RNA进行全基因组表达分析。我们还旨在通过分析其他PTSD相关的共病表型和检查可能的基因-基因相互作用来随访我们的GWAS发现。研究结果有望为RORA和其他候选基因在PTSD发展中的作用提供新的线索。