Low-Coordinate Synthetic Models for Nitrogenase Activity
Low-Coordinate Synthetic Models for Nitrogenase Activity
批准号:
9892347
负责人:
PATRICK L HOLLAND
金额:
$8.52万
依托单位:
依托单位国家:
美国
项目类别:
财政年份:
2004
资助国家:
美国
项目状态:
已结题
起止时间:
2004-04-01 至 2022-07-31
关键词:
AcetyleneActive SitesAddressAmazeAmmoniaAnabolismAtmosphereBehaviorBindingBiochemistryBioinorganic ChemistryBiologicalBiologyChemicalsCleaved cellCommunitiesComplement component C4aComplexComplicationCouplingCrystallizationCrystallographyDataElectrochemistryElectron Nuclear Double ResonanceElectron TransportEnvironmentEnzyme ReactivationEnzymesGoalsIronKineticsKnowledgeLeadLearningLifeLinkModelingMolybdenumNitrogenNitrogen FixationNitrogenaseNuclearPathway interactionsPeriodicityProcessProtein ConformationProteinsReactionResearchRoentgen RaysRoleSiteSolubilitySolventsSpecific qualifier valueSpectrum AnalysisStructureSulfidesSulfurSupport GroupsTestingTimeTranscendWorkabsorptionadductanalogbiological systemscarbenecatalystchemical synthesiscofactorcold temperatureelectron nuclear double resonance spectroscopyfascinatefunctional groupinsightnoveloxidationsmall moleculespectroscopic dataspectroscopic survey
中文摘要
项目摘要
在固氮酶中,铁-硫簇通过执行电子转移位点而超越了它们通常的作用。
N2多电子还原为NH3。这种酶因此显示了铁硫的惊人催化潜力
生物系统中的集群。除了其独特的还原N2的能力之外,FeMoco的活性位点
固氮酶有一个碳化物(C4碳),这是生物化学中的一个新特征。生物合成中间体
和催化机理可能有氢化物,卡宾,N2和肼部分,这是未知的
其他酶。了解固氮酶的结构和功能之间的关系,
与FeMoco有特定相似性的合成分子。虽然它们被简化了,
可以一次测试一个结构特征,而不需要其他辅因子和蛋白质的复杂化。
我们的指导假设是,碳化物保持并释放低配位铁,低配位铁可以形成Fe 2N 2,
Fe 2 OH中间体。在这个假设中,FeMoco中的硫化物供体提供反应性高自旋电子
配置.我们将使用合成铁簇与硫化物,氮化物,
卡宾和碳化物桥。具有这些特征的合成化合物将显示所提出的方法的可行性。
铁硫簇上的官能团,建立这些官能团的光谱特征,并且
显示它们的行为是否与FeMoco生物合成和机制的模型一致。
在拟议的研究中,我们将创造合成的含铁化合物,
以下新功能:不饱和铁硫簇合物,铁硫氢化物簇合物,
自旋铁碳烯和碳化物团簇,以及N2-裂解铁络合物。分离和
这些化合物的表征可以通过使用大体积的支持基团来实现。笨重的
基团还促进结晶,并提高在低温下使用的溶剂中的溶解度。
晶体学、动力学研究、电化学和反应性将被用来阐明原子水平的细节
小分子结合和还原的基本步骤。将通过以下方法评价合成复合物:
ENDOR,红外,拉曼,穆斯堡尔和X射线吸收光谱,以提供之间的联系,
新模型化合物的结构和固氮酶的已知数据。
我们预计,拟议的工作将导致有价值的先例固氮酶的反应途径。
虽然在生物无机化学中对多电子氧化反应的机理已经有了很多了解,
关于多电子生物还原的知识远远落后,特别需要
铁硫簇合物小分子反应的研究。因此,
了解固氮酶中的硫化亚铁簇如何结合和转化小分子,
生活从长远来看,了解生物系统中小分子减少的机制也可能
导致用于化学合成新催化剂,产生更广泛的影响。
英文摘要
Project Summary
In nitrogenases, ironsulfur clusters transcend their usual role as electron transfer sites, by performing the
multielectron reduction of N2 to NH3. This enzyme thus shows the amazing catalytic potential of ironsulfur
clusters in biological systems. In addition to its unique ability to reduce N2, the FeMoco active site of
nitrogenase has a carbide (C4), a feature that is new in biological chemistry. Intermediates in the biosynthesis
and catalytic mechanism are likely to have hydride, carbene, N2, and hydrazine moieties, which are unknown
in other enzymes. Learning the relationship between the structure and function of nitrogenase is aided by
synthetic molecules that have specific similarities to the FeMoco. Though they are simplified, they make it
possible to test structural features one at a time without the complication of the other cofactors and protein.
Our guiding hypothesis is that carbide holds and releases lowcoordinate iron, which can form FeN2 and
FeH intermediates. In this hypothesis, sulfide donors in the FeMoco give reactive highspin electronic
configurations. We will test these ideas using synthetic iron clusters with combinations of sulfide, nitride,
carbene and carbide bridges. Synthetic compounds with these features will show the feasibility of the proposed
functional groups on ironsulfur clusters, establish the spectroscopic signatures of these functional groups, and
show whether their behavior is consistent with the models for FeMoco biosynthesis and mechanism.
In the proposed research, we will create synthetic ironcontaining compounds with each of the
following novel functionalities: unsaturated ironsulfur clusters, ironsulfidehydride clusters, high
spin ironcarbene and carbide clusters, and N2cleaving iron complexes. The isolation and
characterization of these compounds is made possible by the use of bulky supporting groups. The bulky
groups also facilitate crystallization, and enhance solubility in solvents that can be used at low temperature.
Crystallography, kinetic studies, electrochemistry, and reactivity will be used to elucidate the atomiclevel detail
of the elementary steps of smallmolecule binding and reduction. The synthetic complexes will be evaluated by
ENDOR, infrared, Raman, Mössbauer, and Xray absorption spectroscopies to provide a link between the
structures of novel model compounds and the known data for nitrogenases.
We anticipate that the proposed work will lead to valuable precedents for reaction pathways in nitrogenases.
Although much is known about the mechanisms of multielectron oxidation reactions in bioinorganic chemistry,
the knowledge about multielectron biological reductions lags far behind, and there is particular need for
research on smallmolecule reactions of ironsulfur clusters. Therefore, there is fundamental importance in
learning how the ironsulfide cluster in nitrogenase binds and transforms small molecules that are essential for
life. In the long run, understanding the mechanisms of smallmolecule reduction in biological systems may also
lead to new catalysts for use in chemical synthesis, giving an even broader impact.
期刊论文(0)
专著(0)
科研奖励(0)
会议论文
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批准号:9906258
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资助金额:$28.7万
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财政年份:2019
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负责人:PATRICK L HOLLAND
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依托单位:
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批准号:9312826
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资助金额:$32.85万
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批准号:7390716
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资助金额:$18.82万
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批准号:6778988
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资助金额:$19.36万
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依托单位:
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批准号:7218021
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资助金额:$18.82万
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依托单位:
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依托单位:
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批准号:6879710
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资助金额:$19.85万
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依托单位:
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依托单位:
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批准号:9117585
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依托单位:
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批准号:8075476
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资助金额:$30.54万
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依托单位:
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批准号:8259479
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项目类别:
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资助金额:$30.59万
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负责人:PATRICK L HOLLAND
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依托单位:
海外基金