Estimating Cholera Burden with Cross-sectional Immunologic Data
Estimating Cholera Burden with Cross-sectional Immunologic Data
批准号:
10388296
负责人:
Daniel Ted Leung
金额:
$64.72万
依托单位:
依托单位国家:
美国
项目类别:
财政年份:
2018
资助国家:
美国
项目状态:
已结题
起止时间:
2018-05-25 至 2023-10-31
关键词:
AcuteAddressAffectAfricaAntibodiesAntibody ResponseAreaBangladeshBangladeshiBloodCaringCessation of lifeCholeraCholera VaccineClinicalCollaborationsComputer ModelsComputing MethodologiesCountryDataDecision MakingDemographic FactorsDetectionDevelopmentDevicesDiarrheaDiseaseDisease OutbreaksDisease SurveillanceEnrollmentEpidemicEpidemiologyExposure toFundingFutureGenerationsGeneticHaitiHaitianHealth care facilityHealth systemHouseholdImmune responseImmunologicsImmunologyIncidenceIndividualInfectionInfrastructureInterventionJointsKineticsLaboratoriesLateralLinkLogisticsMeasurementMeasuresMethodsMicrobiologyModelingNatureOralPatientsPersonsPopulationPopulations at RiskPredispositionReportingResearch InfrastructureResearch PersonnelResource-limited settingRiskRuralSanitationSensitivity and SpecificitySerologySerumSpecificitySpottingsStandardizationSurveillance MethodsSystemTimeTranslationsUncertaintyUnited States National Institutes of HealthVibrio choleraeVibrio cholerae O1Vibrio cholerae infectionWaterage relatedantibody testbasecohortdiarrheal diseasedisorder riskfightinghigh riskimprovedinsightlateral flow assaymachine learning methodnovelpathogenpredictive modelingserosurveillanceserosurveystatistical and machine learningstatisticstool
中文摘要
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英文摘要
Project Summary/Abstract
Cholera is an acute dehydrating diarrheal disease caused by infection with Vibrio cholerae. It is endemic in
over 50 countries, affecting up to 3 million people and causing more than 100,000 deaths annually. A renewed
global effort to fight cholera is underway, catalyzed by the large on-going epidemic in Haiti and now aided by
new generation oral cholera vaccines. Identifying key populations at high risk of cholera is essential to guide
these activities. Current methods to estimate cholera burden are largely based on clinical reporting with
infrequent microbiological confirmation. These methods are limited by the sporadic nature of outbreaks, poor
surveillance infrastructure, and fundamental uncertainties in the number of asymptomatic or mildly
symptomatic cases. Improved methods of detecting cholera exposure and risk are urgently needed. Detection
of immune responses in serum (serosurveillance) can provide a new avenue for rapid and accurate estimates
of cholera exposure and risk. We currently do not understand what immunological and clinical parameters are
most predictive of recent exposure, nor whether immune responses in areas with different levels of endemicity
are similar. In preliminary studies, we have used machine learning methods on antibody response data from
cholera patients in Bangladesh to classify whether individuals had been exposed in the previous 30-, 90-, or
360-days with high sensitivity and specificity. In this application, we propose to use longitudinal antibody
response kinetics, from populations with diverse genetic and epidemiologic profiles, paired with novel statistical
and machine learning approaches to provide generalizable tools to estimate the incidence of exposure to
Vibrio cholerae from cross sectional serosurveys. In Aim 1, we will develop models to estimate the time since
exposure to Vibrio cholerae and exposure incidence from cross-sectional antibody profiles and demographic
data using previously collected data from a cohort in Bangladesh. These results will allow us to identify the
antibodies and demographic factors that are most useful for prediction of time-since-exposure. In Aim 2, we will
collect longitudinal antibody data from a cohort of cholera cases and household contacts in Haiti to develop
models for estimating exposure incidence from cross-sectional serosurveillance. This cohort will also enable us
to compare the models developed for moderate/severe cases and mild/asymptomatic cases. In Aim 3, we will
optimize and validate field-adapted methods to measure cholera-specific antibodies, including the use of dried
blood spot and lateral flow assays. We will conduct a proof-of-concept cross-sectional serosurvey using these
methods in rural Haiti. Upon the completion of these aims, we will have provided a number of new tools for
measure of susceptibility to cholera in a population. These tools will have the potential to transform cholera
control efforts from the current reactive strategies to proactive ones, with the potential to contribute to disease
elimination.
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DOI:
10.1186/s12916-022-02333-0
发表时间:
2022-04-04
期刊:
BMC medicine
影响因子:
9.3
作者:
[Chen Z, Zheng W, Wu Q, Chen X, Peng C, Tian Y, Sun R, Dong J, Wang M, Zhou X, Zhao Z, Zhong G, Yan X, Liu N, Hao F, Zhao S, Zhuang T, Yang J, Azman AS, Yu H]
通讯作者:
Yu H
DOI:
10.3390/tropicalmed6040192
发表时间:
2021-10-27
期刊:
Tropical medicine and infectious disease
影响因子:
2.9
作者:
[Ryan ET, Leung DT, Jensen O, Weil AA, Bhuiyan TR, Khan AI, Chowdhury F, LaRocque RC, Harris JB, Calderwood SB, Qadri F, Charles RC]
通讯作者:
Charles RC
DOI:
10.1371/journal.pmed.1004286
发表时间:
2023-09
期刊:
PLoS medicine
影响因子:
15.8
作者:
[]
通讯作者:
A Novel Luminescence-Based Serum Bactericidal Assay for Vibrio cholerae Reduces Assay Variation, Is Time- and Cost-Effective, and Directly Measures Continuous Titer Values.
一种新型的基于发光的霍乱弧菌血清杀菌测定可减少测定变异,具有时间和成本效益,并直接测量连续滴度值。
DOI:
10.4269/ajtmh.21-0136
发表时间:
2021
期刊:
The American journal of tropical medicine and hygiene
影响因子:
--
作者:
[Wahlig,TaylorA, Brintz,BenJ, Prettyman,Melanie, Azman,AndrewS, Leung,DanielT]
通讯作者:
Leung,DanielT
Sero-evaluation of Immune Responses to Vibrio cholerae in a Postelimination Setting.
消除后环境中霍乱弧菌免疫反应的血清评估。
DOI:
10.1093/ofid/ofaa136
发表时间:
2020
期刊:
Open forum infectious diseases
影响因子:
4.2
作者:
[Diep,TaiThe, Jensen,Owen, VanThuong,Nguyen, Nhi,NguyenThiNgoc, Thu,NguyenNgocAnh, Quang,VoNgoc, Hieu,TruongCong, Thang,HoangAnh, Thuy,NguyenDieu, Thang,HoVinh, Tuyen,HoTrung, Ngan,LeDang, Ha,NguyenThiThanh, Dung,ThanDuc, Ande]
通讯作者:
Ande
共 16 条
Mentoring patient-oriented researchers in pediatric diarrhea
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批准号:10591728
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项目类别:
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资助金额:$17.19万
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财政年份:2023
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负责人:Daniel Ted Leung
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依托单位:
Development of clinical decision tools for management of diarrhea of children in high and low resource settings
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批准号:10522523
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项目类别:
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资助金额:$46.59万
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财政年份:2018
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负责人:Daniel Ted Leung
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依托单位:
Estimating Cholera Burden with Cross-sectional Immunologic Data
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批准号:10132972
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项目类别:
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资助金额:$66.34万
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财政年份:2018
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负责人:Daniel Ted Leung
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依托单位:
Estimating Cholera Burden with Cross-sectional Immunologic Data
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批准号:9912094
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项目类别:
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资助金额:$66.77万
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财政年份:2018
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负责人:Daniel Ted Leung
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依托单位:
Development of clinical decision tools for management of diarrhea of children in high and low resource settings
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批准号:10649542
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项目类别:
-
资助金额:$45.28万
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财政年份:2018
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负责人:Daniel Ted Leung
-
依托单位:
Development of clinical decision tools for management of diarrhea of children in high and low resource settings
-
批准号:9912093
-
项目类别:
-
资助金额:$39.72万
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财政年份:2018
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负责人:Daniel Ted Leung
-
依托单位:
Mucosal associated invariant T (MAIT) cells in Vibrio cholerae infection and vaccination
-
批准号:10153667
-
项目类别:
-
资助金额:$35.9万
-
财政年份:2017
-
负责人:Daniel Ted Leung
-
依托单位:
Mucosal associated invariant T (MAIT) cells in Vibrio cholerae infection and vaccination
-
批准号:9926810
-
项目类别:
-
资助金额:$35.9万
-
财政年份:2017
-
负责人:Daniel Ted Leung
-
依托单位:
Mucosal associated invariant T (MAIT) cells in Vibrio cholerae infection and vaccination
-
批准号:9398501
-
项目类别:
-
资助金额:$36.98万
-
财政年份:2017
-
负责人:Daniel Ted Leung
-
依托单位:
Immune responses to Vibrio cholerae in children
-
批准号:8517006
-
项目类别:
-
资助金额:$13.72万
-
财政年份:2012
-
负责人:Daniel Ted Leung
-
依托单位:
Immune responses to Vibrio cholerae in children
-
批准号:8351848
-
项目类别:
-
资助金额:$13.72万
-
财政年份:2012
-
负责人:Daniel Ted Leung
-
依托单位:
Immune Responses to Vibrio Cholerae in Children
-
批准号:8844049
-
项目类别:
-
资助金额:$13.72万
-
财政年份:2012
-
负责人:Daniel Ted Leung
-
依托单位:
海外基金