Probe-based two photon microscopy for functional, label-free early cancer diagnosis
Probe-based two photon microscopy for functional, label-free early cancer diagnosis
批准号:
10634520
负责人:
ADELA BEN-YAKAR
金额:
$66.11万
依托单位:
依托单位国家:
美国
项目类别:
财政年份:
2020
资助国家:
美国
项目状态:
未结题
起止时间:
2020-07-01 至 2025-04-30
关键词:
AcademiaAlgorithmsAreaBenignBiological MarkersBiopsyBladderBreastCancer DiagnosticsCancer PatientCancerousCarcinomaCervicalCervical Cancer ScreeningCervix UteriCessation of lifeClinicClinicalClinical ResearchClinical TreatmentCollectionColonColposcopyConsumptionCustomCytoplasmDetectionDevelopmentDiagnosisDiagnostic ProcedureDiameterEarly DiagnosisEnsureEpitheliumEsophagusEvaluationFiberGoalsHandHistologicHistopathologyHumanImageImage AnalysisIn SituInflammationLabelLasersLesionLocationLungMalignant NeoplasmsMeasurementMedical centerMetabolicMetabolismMetaplasiaMethodsMitochondriaMorphologyNADHNatureNuclearOpticsOrganOutcomeOxidation-ReductionPainPatientsPhysiciansProcessPrognosisPropertyProtocols documentationRelaxationReportingResolutionSensitivity and SpecificitySignal TransductionSiteSkinSpecific qualifier valueSpecificitySurvival RateSystemTechniquesTestingThickTimeTissue imagingTissuesTrainingTriageVariantVisualizationaustincancer carecancer diagnosiscare costscervical biopsyclinical diagnosiscostdesigndetection sensitivitydiagnostic accuracydiagnostic strategyeffective therapyexperiencefirst-in-humanfluorescence imagingforgingimaging platformimaging probeimaging systemimprovedin vivoin vivo imagingin vivo imaging systeminnovationminiaturizemultiphoton imagingportabilityprecision medicinepremalignantpsychologicquantitative imagingsubmicrontechnology developmenttissue biomarkerstwo photon microscopytwo-photon
中文摘要
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英文摘要
Improvements in the detection of cancerous changes at the pre-invasive stage have the potential to make a
significant impact in the prognosis and treatment of most cancer patients. Despite important advances in our
understanding of cancer pathobiology, the most prevalent diagnostic methods continue to rely on low
magnification tissue visualization, followed by biopsy and histopathology. This process is invasive, often limited
in its sensitivity and/or specificity, time-consuming, and relies heavily on the expertise of highly trained
physicians, who in turn exploit primarily morphological tissue changes for their assessments. These limitations
present barriers to effective treatment and raise monetary and psychological costs. Our long-term objective is to
transform pre- and early epithelial cancer diagnosis through the use of functional (metabolic) and morphological
tissue biomarkers that are extracted non-invasively, automatically, and in near real time from fiber-probe-based
endogenous two-photon (2P) images. In this proposal, we aim to establish and validate such measurements and
biomarkers for the detection of human cervical pre-cancers in vivo. The cervix is an ideal organ for developing
and testing our approach as it relaxes some of the size limitations presented for endoscopic applications,
enabling us to focus on demonstrating the principles of this innovative platform. In addition, we expect that our
proposed methods will enable significant near-term improvements in the sensitivity and specificity of detection
of cervical pre-cancerous lesions during colposcopy and triage with therapy. To achieve our goals, we have
forged a strong partnership among colleagues in academia and the clinic, leveraging strengths and expertise of
multiple teams. Specifically, we will exploit our experience in laser development (Xu, Cornell) and multiphoton
imaging probe design (Ben-Yakar, UT Austin) to develop a probe-based 2P imaging system that is portable and
enables fast image acquisition throughout the cervical epithelium depth with submicron resolution (Aim 1). The
final design specifications will be optimized to enable automated, near-real time analysis of images that provides
quantitative metrics of metabolic function and morphology (Aim 2). In particular, we will assess: a) multiple
quantitative biomarkers of cellular metabolism based on redox ratio and mitochondrial organization parameters
extracted from endogenous NAD(P)H and FAD 2P excited fluorescence images of the epithelium, and b)
morphological metrics associated with depth-dependent variations of the nuclear to cytoplasmic area ratio and
epithelial thickness (Georgakoudi, Tufts). The real time algorithms will be established using freshly excised
normal and pre-cancerous human cervical tissues (Aim 2). They will be tested and further optimized in vivo when
the innovative 2P imaging platform will be used to perform the first-in-human 2P probe-based imaging during
colposcopy (Thieu/Genega, Tufts Medical Center) (Aim3). We expect these studies will provide high sensitivity
and specificity of cervical pre-cancer detection and will enable further studies that have the potential to change
the paradigm of diagnosis and ultimately prognosis for a broad range of cancers that are accessible via a probe.
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Restoration of metabolic functional metrics from label-free, two-photon human tissue images using multiscale deep-learning-based denoising algorithms.
使用基于多尺度的基于深度学习的denoising算法,从无标签的两光子人体组织图像中恢复代谢功能指标。
DOI:
10.1117/1.jbo.28.12.126006
发表时间:
2023-12
期刊:
JOURNAL OF BIOMEDICAL OPTICS
影响因子:
3.5
作者:
[Vora, Nilay, Polleys, Christopher M., Sakellariou, Filippos, Georgalis, Georgios, Thieu, Hong-Thao, Genega, Elizabeth M., Jahanseir, Narges, Patra, Abani, Miller, Eric, Georgakoudi, Irene]
通讯作者:
Georgakoudi, Irene
DOI:
10.1146/annurev-bioeng-071516-044730
发表时间:
2023-06-08
期刊:
Annual review of biomedical engineering
影响因子:
9.7
作者:
[]
通讯作者:
Extracellular Hsp90 Binds to and Aligns Collagen-1 to Enhance Breast Cancer Cell Invasiveness.
细胞外HSP90与胶原-1结合并对齐以增强乳腺癌细胞的侵入性。
DOI:
10.3390/cancers15215237
发表时间:
2023-10-31
期刊:
CANCERS
影响因子:
5.2
作者:
[Singh, Pragya, Ramanathan, Varshini, Zhang, Yang, Georgakoudi, Irene, Jay, Daniel G.]
通讯作者:
Jay, Daniel G.
Formalin fixation and paraffin embedding interfere with preservation of optical metabolic assessments based on endogenous NAD(P)H and FAD two photon excited fluorescence.
福尔马林固定和石蜡包埋会干扰基于内源性 NAD(P)H 和 FAD 双光子激发荧光的光学代谢评估的保存。
DOI:
10.1101/2023.06.16.545363
发表时间:
2023
期刊:
bioRxiv : the preprint server for biology
影响因子:
--
作者:
[Sánchez-Hernández,Adriana, Polleys,ChristopherM, Georgakoudi,Irene]
通讯作者:
Georgakoudi,Irene
Three-dimensional fluorescence imaging flow cytometry at up to million frames per second
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批准号:10568627
-
项目类别:
-
资助金额:$41.55万
-
财政年份:2023
-
负责人:ADELA BEN-YAKAR
-
依托单位:
Probe-based two photon microscopy for functional, label-free early cancer diagnosis
-
批准号:10398159
-
项目类别:
-
资助金额:$67.41万
-
财政年份:2020
-
负责人:ADELA BEN-YAKAR
-
依托单位:
Probe-based two photon microscopy for functional, label-free early cancer diagnosis
-
批准号:10178013
-
项目类别:
-
资助金额:$66.97万
-
财政年份:2020
-
负责人:ADELA BEN-YAKAR
-
依托单位:
Probe-based two photon microscopy for functional, label-free early cancer diagnosis
-
批准号:10030979
-
项目类别:
-
资助金额:$74.7万
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财政年份:2020
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负责人:ADELA BEN-YAKAR
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依托单位:
Ultrafast Laser Phonosurgery for Biomaterial Localization in Scarred Vocal Folds
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批准号:9751242
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项目类别:
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资助金额:$49.61万
-
财政年份:2016
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负责人:ADELA BEN-YAKAR
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依托单位:
High-speed opto-fluidics to screen entire nervous system in aging and disease
-
批准号:8181677
-
项目类别:
-
资助金额:$61.57万
-
财政年份:2011
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负责人:ADELA BEN-YAKAR
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依托单位:
High-speed opto-fluidics to screen entire nervous system in aging and disease
-
批准号:8336957
-
项目类别:
-
资助金额:$59.13万
-
财政年份:2011
-
负责人:ADELA BEN-YAKAR
-
依托单位:
High-speed opto-fluidics to screen entire nervous system in aging and disease
-
批准号:8722424
-
项目类别:
-
资助金额:$54.3万
-
财政年份:2011
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负责人:ADELA BEN-YAKAR
-
依托单位:
High-speed opto-fluidics to screen entire nervous system in aging and disease
-
批准号:8856453
-
项目类别:
-
资助金额:$53.67万
-
财政年份:2011
-
负责人:ADELA BEN-YAKAR
-
依托单位:
High-speed opto-fluidics to screen entire nervous system in aging and disease
-
批准号:8528445
-
项目类别:
-
资助金额:$55.12万
-
财政年份:2011
-
负责人:ADELA BEN-YAKAR
-
依托单位:
Microfluidic-microtiter interface for rapid large-scale screenings of C. elegans
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批准号:7942861
-
项目类别:
-
资助金额:$22.28万
-
财政年份:2009
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负责人:ADELA BEN-YAKAR
-
依托单位:
Femtosecond laser axotomy for in vivo nerve regeneration studies in C elegans
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批准号:7687446
-
项目类别:
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资助金额:$42.4万
-
财政年份:2007
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负责人:ADELA BEN-YAKAR
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依托单位:
Femtosecond laser axotomy for in vivo nerve regeneration studies in C elegans
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批准号:7905845
-
项目类别:
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-
财政年份:2007
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负责人:ADELA BEN-YAKAR
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依托单位:
Integrated Microfluidics for Nerve Regeneration Studies using Laser Nano-Axotomy
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批准号:7241885
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项目类别:
-
资助金额:$16.64万
-
财政年份:2007
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负责人:ADELA BEN-YAKAR
-
依托单位:
Integrated Microfluidics for Nerve Regeneration Studies using Laser Nano-Axotomy
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-
资助金额:$18.63万
-
财政年份:2007
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负责人:ADELA BEN-YAKAR
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依托单位:
Femtosecond laser axotomy for in vivo nerve regeneration studies in C elegans
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-
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-
财政年份:2007
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负责人:ADELA BEN-YAKAR
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依托单位:
Femtosecond laser axotomy for in vivo nerve regeneration studies in C elegans
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Femtosecond laser axotomy for in vivo nerve regeneration studies in C elegans
-
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Early Cancer Detection with Two-Photon Luminescence From Gold Nanorods
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批准号:7289223
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项目类别:
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资助金额:$7.5万
-
财政年份:2006
-
负责人:ADELA BEN-YAKAR
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依托单位:
Early Cancer Detection with Two-Photon Luminescence From Gold Nanorods
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批准号:7214473
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-
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依托单位:
海外基金